Analysis of interatomic Contacts of Structural Units in PDB entry:
6X5U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6X5U entry

There are 3 chains in PDB entry 6X5U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 108	GLU 574
B	LEU 108	GLU 574
C	LEU 108	GLN 398

There are123 helices in PDB entry 6X5U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	109	138	Right-handed alpha
Helix 2	AA2	A	141	171	Right-handed alpha
Helix 3	AA3	A	175	200	Right-handed alpha
Helix 4	AA4	A	219	237	Right-handed alpha
Helix 5	AA5	A	254	258	Right-handed 310
Helix 6	AA6	A	293	297	Right-handed 310
Helix 7	AA7	A	312	320	Right-handed alpha
Helix 8	AA8	A	322	336	Right-handed alpha
Helix 9	AA9	A	339	354	Right-handed alpha
Helix 10	AB1	A	378	395	Right-handed alpha
Helix 11	AB2	A	412	421	Right-handed alpha
Helix 12	AB3	A	429	436	Right-handed alpha
Helix 13	AB4	A	443	460	Right-handed alpha
Helix 14	AB5	A	469	481	Right-handed alpha
Helix 15	AB6	A	570	574	Right-handed 310
Helix 16	AB7	B	109	138	Right-handed alpha
Helix 17	AB8	B	141	171	Right-handed alpha
Helix 18	AB9	B	175	200	Right-handed alpha
Helix 19	AC1	B	219	237	Right-handed alpha
Helix 20	AC2	B	254	258	Right-handed 310
Helix 21	AC3	B	293	297	Right-handed 310
Helix 22	AC4	B	312	320	Right-handed alpha
Helix 23	AC5	B	322	336	Right-handed alpha
Helix 24	AC6	B	339	354	Right-handed alpha
Helix 25	AC7	B	366	370	Right-handed 310
Helix 26	AC8	B	378	395	Right-handed alpha
Helix 27	AC9	B	412	421	Right-handed alpha
Helix 28	AD1	B	429	436	Right-handed alpha
Helix 29	AD2	B	443	460	Right-handed alpha
Helix 30	AD3	B	469	481	Right-handed alpha
Helix 31	AD4	B	570	574	Right-handed 310
Helix 32	AD5	C	109	138	Right-handed alpha
Helix 33	AD6	C	141	171	Right-handed alpha
Helix 34	AD7	C	175	200	Right-handed alpha
Helix 35	AD8	C	219	237	Right-handed alpha
Helix 36	AD9	C	254	258	Right-handed 310
Helix 37	AE1	C	281	286	Right-handed 310
Helix 38	AE2	C	293	297	Right-handed 310
Helix 39	AE3	C	312	320	Right-handed alpha
Helix 40	AE4	C	322	336	Right-handed alpha
Helix 41	AE5	C	339	354	Right-handed alpha
Helix 42	AE6	C	378	395	Right-handed alpha
Helix 43	AE7	C	412	421	Right-handed alpha
Helix 44	AE8	C	429	436	Right-handed alpha
Helix 45	AE9	C	443	460	Right-handed alpha
Helix 46	AF1	C	469	481	Right-handed alpha
Helix 47	AF2	D	109	138	Right-handed alpha
Helix 48	AF3	D	141	171	Right-handed alpha
Helix 49	AF4	D	172	174	Right-handed 310
Helix 50	AF5	D	175	200	Right-handed alpha
Helix 51	AF6	D	219	237	Right-handed alpha
Helix 52	AF7	D	254	258	Right-handed 310
Helix 53	AF8	D	293	297	Right-handed 310
Helix 54	AF9	D	312	320	Right-handed alpha
Helix 55	AG1	D	322	336	Right-handed alpha
Helix 56	AG2	D	339	354	Right-handed alpha
Helix 57	AG3	D	378	395	Right-handed alpha
Helix 58	AG4	D	412	421	Right-handed alpha
Helix 59	AG5	D	429	436	Right-handed alpha
Helix 60	AG6	D	443	460	Right-handed alpha
Helix 61	AG7	D	469	481	Right-handed alpha
Helix 62	AG8	D	570	574	Right-handed 310
Helix 63	AG9	E	109	138	Right-handed alpha
Helix 64	AH1	E	141	171	Right-handed alpha
Helix 65	AH2	E	175	200	Right-handed alpha
Helix 66	AH3	E	219	237	Right-handed alpha
Helix 67	AH4	E	254	258	Right-handed 310
Helix 68	AH5	E	293	297	Right-handed 310
Helix 69	AH6	E	312	320	Right-handed alpha
Helix 70	AH7	E	322	336	Right-handed alpha
Helix 71	AH8	E	339	354	Right-handed alpha
Helix 72	AH9	E	366	370	Right-handed 310
Helix 73	AI1	E	378	395	Right-handed alpha
Helix 74	AI2	E	412	421	Right-handed alpha
Helix 75	AI3	E	429	436	Right-handed alpha
Helix 76	AI4	E	443	460	Right-handed alpha
Helix 77	AI5	E	469	481	Right-handed alpha
Helix 78	AI6	F	109	138	Right-handed alpha
Helix 79	AI7	F	141	171	Right-handed alpha
Helix 80	AI8	F	175	200	Right-handed alpha
Helix 81	AI9	F	219	237	Right-handed alpha
Helix 82	AJ1	F	254	258	Right-handed 310
Helix 83	AJ2	F	293	297	Right-handed 310
Helix 84	AJ3	F	312	320	Right-handed alpha
Helix 85	AJ4	F	322	336	Right-handed alpha
Helix 86	AJ5	F	339	354	Right-handed alpha
Helix 87	AJ6	F	378	395	Right-handed alpha
Helix 88	AJ7	F	412	421	Right-handed alpha
Helix 89	AJ8	F	429	436	Right-handed alpha
Helix 90	AJ9	F	437	442	Right-handed alpha
Helix 91	AK1	F	443	460	Right-handed alpha
Helix 92	AK2	F	469	481	Right-handed alpha
Helix 93	AK3	G	109	138	Right-handed alpha
Helix 94	AK4	G	141	171	Right-handed alpha
Helix 95	AK5	G	175	200	Right-handed alpha
Helix 96	AK6	G	219	237	Right-handed alpha
Helix 97	AK7	G	254	258	Right-handed 310
Helix 98	AK8	G	293	297	Right-handed 310
Helix 99	AK9	G	312	320	Right-handed alpha
Helix 100	AL1	G	322	336	Right-handed alpha
Helix 101	AL2	G	339	353	Right-handed alpha
Helix 102	AL3	G	378	395	Right-handed alpha
Helix 103	AL4	G	412	421	Right-handed alpha
Helix 104	AL5	G	429	436	Right-handed alpha
Helix 105	AL6	G	443	460	Right-handed alpha
Helix 106	AL7	G	469	481	Right-handed alpha
Helix 107	AL8	H	109	138	Right-handed alpha
Helix 108	AL9	H	141	171	Right-handed alpha
Helix 109	AM1	H	175	200	Right-handed alpha
Helix 110	AM2	H	219	237	Right-handed alpha
Helix 111	AM3	H	254	258	Right-handed 310
Helix 112	AM4	H	281	286	Right-handed 310
Helix 113	AM5	H	293	297	Right-handed 310
Helix 114	AM6	H	312	320	Right-handed alpha
Helix 115	AM7	H	322	336	Right-handed alpha
Helix 116	AM8	H	339	353	Right-handed alpha
Helix 117	AM9	H	366	370	Right-handed 310
Helix 118	AN1	H	378	395	Right-handed alpha
Helix 119	AN2	H	412	421	Right-handed alpha
Helix 120	AN3	H	429	436	Right-handed alpha
Helix 121	AN4	H	443	460	Right-handed alpha
Helix 122	AN5	H	469	481	Right-handed alpha
Helix 123	AN6	H	570	574	Right-handed 310

There are 32 sheets in PDB entry 6X5U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	209	213	parallel
Strand 3	A	288	290	parallel
Strand 4	A	274	276	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	309	first strand
Strand 2	A	564	565	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	427	first strand
Strand 2	A	402	408	parallel
Strand 3	A	359	364	parallel
Strand 4	A	462	465	parallel
Strand 5	A	490	492	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	554	first strand
Strand 2	A	539	544	anti-parallel
Strand 3	A	528	534	anti-parallel
Strand 4	A	506	509	anti-parallel
Strand 5	A	558	560	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	209	213	parallel
Strand 3	B	288	291	parallel
Strand 4	B	274	276	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	309	first strand
Strand 2	B	564	565	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	427	first strand
Strand 2	B	402	408	parallel
Strand 3	B	359	364	parallel
Strand 4	B	463	465	parallel
Strand 5	B	490	492	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	549	554	first strand
Strand 2	B	539	544	anti-parallel
Strand 3	B	528	534	anti-parallel
Strand 4	B	506	509	anti-parallel
Strand 5	B	558	560	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	244	first strand
Strand 2	C	209	213	parallel
Strand 3	C	288	290	parallel
Strand 4	C	274	276	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	309	first strand
Strand 2	C	564	565	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	427	first strand
Strand 2	C	402	408	parallel
Strand 3	C	359	364	parallel
Strand 4	C	462	465	parallel
Strand 5	C	490	492	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	550	554	first strand
Strand 2	C	539	544	anti-parallel
Strand 3	C	528	534	anti-parallel
Strand 4	C	506	509	anti-parallel
Strand 5	C	558	560	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	244	first strand
Strand 2	D	209	213	parallel
Strand 3	D	288	291	parallel
Strand 4	D	274	276	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	307	309	first strand
Strand 2	D	563	565	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	424	427	first strand
Strand 2	D	402	408	parallel
Strand 3	D	359	364	parallel
Strand 4	D	462	465	parallel
Strand 5	D	490	492	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	549	554	first strand
Strand 2	D	539	544	anti-parallel
Strand 3	D	528	534	anti-parallel
Strand 4	D	506	509	anti-parallel
Strand 5	D	558	560	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	244	first strand
Strand 2	E	209	213	parallel
Strand 3	E	288	291	parallel
Strand 4	E	274	276	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	308	309	first strand
Strand 2	E	564	565	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	424	427	first strand
Strand 2	E	402	408	parallel
Strand 3	E	359	364	parallel
Strand 4	E	462	465	parallel
Strand 5	E	490	492	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	549	554	first strand
Strand 2	E	539	544	anti-parallel
Strand 3	E	528	534	anti-parallel
Strand 4	E	506	509	anti-parallel
Strand 5	E	558	560	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	240	244	first strand
Strand 2	F	209	213	parallel
Strand 3	F	288	291	parallel
Strand 4	F	274	276	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	308	309	first strand
Strand 2	F	564	565	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	424	427	first strand
Strand 2	F	402	408	parallel
Strand 3	F	359	364	parallel
Strand 4	F	462	465	parallel
Strand 5	F	490	492	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	549	554	first strand
Strand 2	F	539	544	anti-parallel
Strand 3	F	528	534	anti-parallel
Strand 4	F	506	509	anti-parallel
Strand 5	F	558	560	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	244	first strand
Strand 2	G	209	213	parallel
Strand 3	G	288	291	parallel
Strand 4	G	274	276	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	308	309	first strand
Strand 2	G	564	565	parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	424	427	first strand
Strand 2	G	402	408	parallel
Strand 3	G	359	364	parallel
Strand 4	G	462	465	parallel
Strand 5	G	490	492	parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	550	554	first strand
Strand 2	G	539	544	anti-parallel
Strand 3	G	528	534	anti-parallel
Strand 4	G	506	509	anti-parallel
Strand 5	G	558	560	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	240	244	first strand
Strand 2	H	209	213	parallel
Strand 3	H	288	291	parallel
Strand 4	H	274	276	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	308	309	first strand
Strand 2	H	564	565	parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	424	427	first strand
Strand 2	H	402	408	parallel
Strand 3	H	359	364	parallel
Strand 4	H	463	465	parallel
Strand 5	H	490	492	parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	549	554	first strand
Strand 2	H	539	544	anti-parallel
Strand 3	H	528	534	anti-parallel
Strand 4	H	506	509	anti-parallel
Strand 5	H	558	560	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6X5U

Analysis of interatomic Contacts of Structural Units in PDB entry:
6X5U