Analysis of interatomic Contacts of Structural Units in PDB entry:
6X84


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X84 entry

There are 2 chains in PDB entry 6X84 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0SER 415
B
 SER 0THR 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6X84. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 29Right-handed alpha
Helix 2
AA2
A
41 55Right-handed alpha
Helix 3
AA3
A
68 75Right-handed alpha
Helix 4
AA4
A
80 89Right-handed alpha
Helix 5
AA5
A
93 97Right-handed 310
Helix 6
AA6
A
98 103Right-handed alpha
Helix 7
AA7
A
104 106Right-handed 310
Helix 8
AA8
A
129 135Right-handed alpha
Helix 9
AA9
A
145 159Right-handed alpha
Helix 10
AB1
A
170 182Right-handed alpha
Helix 11
AB2
A
187 192Right-handed alpha
Helix 12
AB3
A
204 220Right-handed alpha
Helix 13
AB4
A
230 238Right-handed alpha
Helix 14
AB5
A
250 258Right-handed alpha
Helix 15
AB6
A
294 310Right-handed alpha
Helix 16
AB7
A
310 322Right-handed alpha
Helix 17
AB8
A
327 337Right-handed alpha
Helix 18
AB9
A
338 343Right-handed alpha
Helix 19
AC1
A
347 354Right-handed alpha
Helix 20
AC2
A
369 386Right-handed alpha
Helix 21
AC3
A
390 413Right-handed alpha
Helix 22
AC4
B
11 29Right-handed alpha
Helix 23
AC5
B
41 55Right-handed alpha
Helix 24
AC6
B
68 76Right-handed alpha
Helix 25
AC7
B
80 89Right-handed alpha
Helix 26
AC8
B
93 97Right-handed 310
Helix 27
AC9
B
98 103Right-handed alpha
Helix 28
AD1
B
104 106Right-handed 310
Helix 29
AD2
B
129 136Right-handed alpha
Helix 30
AD3
B
145 159Right-handed alpha
Helix 31
AD4
B
169 175Right-handed alpha
Helix 32
AD5
B
175 182Right-handed alpha
Helix 33
AD6
B
187 192Right-handed alpha
Helix 34
AD7
B
204 220Right-handed alpha
Helix 35
AD8
B
230 238Right-handed alpha
Helix 36
AD9
B
250 258Right-handed alpha
Helix 37
AE1
B
294 310Right-handed alpha
Helix 38
AE2
B
310 322Right-handed alpha
Helix 39
AE3
B
327 337Right-handed alpha
Helix 40
AE4
B
338 343Right-handed alpha
Helix 41
AE5
B
347 354Right-handed alpha
Helix 42
AE6
B
369 386Right-handed alpha
Helix 43
AE7
B
390 412Right-handed alpha
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There are 6 sheets in PDB entry 6X84. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
2 8parallel
Strand 3
A
61 65parallel
Strand 4
A
283 290anti-parallel
Strand 5
A
78 79anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
2 8parallel
Strand 3
A
61 65parallel
Strand 4
A
283 290anti-parallel
Strand 5
A
116 121anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
163 168parallel
Strand 3
A
241 247parallel
Strand 4
A
123 128anti-parallel
Strand 5
A
262 265anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 38first strand
Strand 2
B
2 8parallel
Strand 3
B
61 65parallel
Strand 4
B
283 290anti-parallel
Strand 5
B
78 79anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 38first strand
Strand 2
B
2 8parallel
Strand 3
B
61 65parallel
Strand 4
B
283 290anti-parallel
Strand 5
B
116 121anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 167first strand
Strand 2
B
241 247parallel
Strand 3
B
123 128anti-parallel
Strand 4
B
262 266anti-parallel
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