Analysis of interatomic Contacts of Structural Units in PDB entry:
6X94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X94 entry

There is 1 chain in PDB entry 6X94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6X94. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 10Right-handed alpha
Helix 2
AA2
A
10 21Right-handed alpha
Helix 3
AA3
A
25 65Right-handed alpha
Helix 4
AA4
A
69 102Right-handed alpha
Helix 5
AA5
A
117 121Right-handed 310
Helix 6
AA6
A
139 147Right-handed alpha
Helix 7
AA7
A
152 159Right-handed alpha
Helix 8
AA8
A
168 188Right-handed alpha
Helix 9
AA9
A
200 207Right-handed alpha
Helix 10
AB1
A
213 217Right-handed 310
Helix 11
AB2
A
220 224Right-handed 310
Helix 12
AB3
A
230 236Right-handed alpha
Helix 13
AB4
A
237 239Right-handed 310
Helix 14
AB5
A
287 289Right-handed 310
Helix 15
AB6
A
290 310Right-handed alpha
Helix 16
AB7
A
338 341Right-handed 310
Helix 17
AB8
A
354 361Right-handed alpha
Helix 18
AB9
A
383 394Right-handed alpha
Helix 19
AC1
A
404 412Right-handed 310
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There are 5 sheets in PDB entry 6X94. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
313 317anti-parallel
Strand 3
A
329 336anti-parallel
Strand 4
A
343 351anti-parallel
Strand 5
A
374 382anti-parallel
Strand 6
A
276 286anti-parallel
Strand 7
A
248 257anti-parallel
Strand 8
A
191 192parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
165 166anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
225 226anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
362 364parallel
Strand 3
A
371 372anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
416 417anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il