Analysis of interatomic Contacts of Structural Units in PDB entry:
6X9H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6X9H entry

There are 3 chains in PDB entry 6X9H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 43	ASP 454
B	SER 41	ALA 456
C	ALA 48	GLU 458

There are 49 helices in PDB entry 6X9H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	71	Right-handed alpha
Helix 2	AA2	A	100	104	Right-handed 310
Helix 3	AA3	A	105	113	Right-handed alpha
Helix 4	AA4	A	132	143	Right-handed alpha
Helix 5	AA5	A	154	163	Right-handed alpha
Helix 6	AA6	A	165	169	Right-handed alpha
Helix 7	AA7	A	181	183	Right-handed 310
Helix 8	AA8	A	226	230	Right-handed 310
Helix 9	AA9	A	258	263	Right-handed alpha
Helix 10	AB1	A	305	323	Right-handed alpha
Helix 11	AB2	A	337	344	Right-handed alpha
Helix 12	AB3	A	344	353	Right-handed alpha
Helix 13	AB4	A	382	394	Right-handed alpha
Helix 14	AB5	A	396	403	Right-handed alpha
Helix 15	AB6	A	426	442	Right-handed alpha
Helix 16	AB7	A	445	452	Right-handed alpha
Helix 17	AB8	B	42	71	Right-handed alpha
Helix 18	AB9	B	100	104	Right-handed 310
Helix 19	AC1	B	105	113	Right-handed alpha
Helix 20	AC2	B	132	143	Right-handed alpha
Helix 21	AC3	B	154	163	Right-handed alpha
Helix 22	AC4	B	165	169	Right-handed alpha
Helix 23	AC5	B	181	183	Right-handed 310
Helix 24	AC6	B	214	217	Right-handed 310
Helix 25	AC7	B	226	230	Right-handed 310
Helix 26	AC8	B	258	263	Right-handed alpha
Helix 27	AC9	B	305	323	Right-handed alpha
Helix 28	AD1	B	337	344	Right-handed alpha
Helix 29	AD2	B	344	354	Right-handed alpha
Helix 30	AD3	B	382	394	Right-handed alpha
Helix 31	AD4	B	396	403	Right-handed alpha
Helix 32	AD5	B	426	442	Right-handed alpha
Helix 33	AD6	B	445	450	Right-handed alpha
Helix 34	AD7	B	450	456	Right-handed alpha
Helix 35	AD8	C	50	71	Right-handed alpha
Helix 36	AD9	C	105	113	Right-handed alpha
Helix 37	AE1	C	132	143	Right-handed alpha
Helix 38	AE2	C	154	163	Right-handed alpha
Helix 39	AE3	C	165	169	Right-handed alpha
Helix 40	AE4	C	181	183	Right-handed 310
Helix 41	AE5	C	226	230	Right-handed 310
Helix 42	AE6	C	258	263	Right-handed alpha
Helix 43	AE7	C	305	323	Right-handed alpha
Helix 44	AE8	C	337	344	Right-handed alpha
Helix 45	AE9	C	344	356	Right-handed alpha
Helix 46	AF1	C	382	393	Right-handed alpha
Helix 47	AF2	C	396	403	Right-handed alpha
Helix 48	AF3	C	426	442	Right-handed alpha
Helix 49	AF4	C	445	455	Right-handed alpha

There are 12 sheets in PDB entry 6X9H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	82	first strand
Strand 2	A	404	423	anti-parallel
Strand 3	A	219	224	anti-parallel
Strand 4	A	170	175	anti-parallel
Strand 5	A	178	179	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	82	first strand
Strand 2	A	404	423	anti-parallel
Strand 3	A	270	282	parallel
Strand 4	A	367	379	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	A	209	210	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	190	first strand
Strand 2	A	193	198	anti-parallel
Strand 3	A	90	95	anti-parallel
Strand 4	A	246	251	anti-parallel
Strand 5	A	264	266	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	82	first strand
Strand 2	B	404	423	anti-parallel
Strand 3	B	219	224	anti-parallel
Strand 4	B	170	175	anti-parallel
Strand 5	B	178	179	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	82	first strand
Strand 2	B	404	423	anti-parallel
Strand 3	B	270	282	parallel
Strand 4	B	367	379	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	87	first strand
Strand 2	B	209	210	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	190	first strand
Strand 2	B	193	198	anti-parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	246	251	anti-parallel
Strand 5	B	264	266	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	82	first strand
Strand 2	C	404	423	anti-parallel
Strand 3	C	219	224	anti-parallel
Strand 4	C	170	175	anti-parallel
Strand 5	C	178	179	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	82	first strand
Strand 2	C	404	423	anti-parallel
Strand 3	C	270	282	parallel
Strand 4	C	367	379	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	87	first strand
Strand 2	C	209	210	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	185	190	first strand
Strand 2	C	193	198	anti-parallel
Strand 3	C	90	95	anti-parallel
Strand 4	C	246	251	anti-parallel
Strand 5	C	264	266	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6X9H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6X9H