Analysis of interatomic Contacts of Structural Units in PDB entry:
6X9L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X9L entry

There are 2 chains in PDB entry 6X9L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6LEU 490
B
 LEU 6ASP 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6X9L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 72Right-handed alpha
Helix 2
AA2
A
74 92Right-handed alpha
Helix 3
AA3
A
92 105Right-handed alpha
Helix 4
AA4
A
107 114Right-handed alpha
Helix 5
AA5
A
116 130Right-handed alpha
Helix 6
AA6
A
160 175Right-handed alpha
Helix 7
AA7
A
187 202Right-handed alpha
Helix 8
AA8
A
217 225Right-handed alpha
Helix 9
AA9
A
236 248Right-handed alpha
Helix 10
AB1
A
249 251Right-handed 310
Helix 11
AB2
A
271 285Right-handed alpha
Helix 12
AB3
A
286 289Right-handed 310
Helix 13
AB4
A
303 317Right-handed alpha
Helix 14
AB5
A
335 352Right-handed alpha
Helix 15
AB6
A
385 390Right-handed alpha
Helix 16
AB7
A
404 414Right-handed alpha
Helix 17
AB8
A
427 436Right-handed alpha
Helix 18
AB9
A
459 461Right-handed 310
Helix 19
AC1
A
468 475Right-handed alpha
Helix 20
AC2
B
52 72Right-handed alpha
Helix 21
AC3
B
74 92Right-handed alpha
Helix 22
AC4
B
92 105Right-handed alpha
Helix 23
AC5
B
107 114Right-handed alpha
Helix 24
AC6
B
116 130Right-handed alpha
Helix 25
AC7
B
160 175Right-handed alpha
Helix 26
AC8
B
187 202Right-handed alpha
Helix 27
AC9
B
216 225Right-handed alpha
Helix 28
AD1
B
236 248Right-handed alpha
Helix 29
AD2
B
249 251Right-handed 310
Helix 30
AD3
B
271 285Right-handed alpha
Helix 31
AD4
B
286 289Right-handed 310
Helix 32
AD5
B
303 317Right-handed alpha
Helix 33
AD6
B
335 352Right-handed alpha
Helix 34
AD7
B
385 390Right-handed alpha
Helix 35
AD8
B
404 414Right-handed alpha
Helix 36
AD9
B
427 438Right-handed alpha
Helix 37
AE1
B
459 461Right-handed 310
Helix 38
AE2
B
468 475Right-handed alpha
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There are 10 sheets in PDB entry 6X9L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
24 26anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
44 49anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
143 148anti-parallel
Strand 3
A
477 482anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
178 182parallel
Strand 3
A
151 155parallel
Strand 4
A
230 234parallel
Strand 5
A
253 257parallel
Strand 6
A
463 464anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 358first strand
Strand 2
A
376 379anti-parallel
Strand 3
A
396 402parallel
Strand 4
A
296 300parallel
Strand 5
A
263 266parallel
Strand 6
A
422 424parallel
Strand 7
A
444 445parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 21first strand
Strand 2
B
24 26anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
44 49anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
143 148anti-parallel
Strand 3
B
477 482anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 210first strand
Strand 2
B
178 182parallel
Strand 3
B
151 155parallel
Strand 4
B
230 234parallel
Strand 5
B
253 257parallel
Strand 6
B
463 464anti-parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 358first strand
Strand 2
B
376 379anti-parallel
Strand 3
B
396 402parallel
Strand 4
B
296 300parallel
Strand 5
B
263 266parallel
Strand 6
B
420 424parallel
Strand 7
B
442 445parallel
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