Analysis of interatomic Contacts of Structural Units in PDB entry:
6X9N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6X9N entry

There are 5 chains in PDB entry 6X9N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 15	GLN 318
B	HIS 15	GLY 319
C	HIS 15	GLY 319
D	HIS 15	GLY 319
E	HIS 15	ARG 151

There are112 helices in PDB entry 6X9N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	38	Right-handed alpha
Helix 2	AA2	A	50	59	Right-handed alpha
Helix 3	AA3	A	68	73	Right-handed 310
Helix 4	AA4	A	88	97	Right-handed alpha
Helix 5	AA5	A	104	111	Right-handed alpha
Helix 6	AA6	A	112	115	Right-handed 310
Helix 7	AA7	A	125	140	Right-handed alpha
Helix 8	AA8	A	177	181	Right-handed 310
Helix 9	AA9	A	195	200	Right-handed 310
Helix 10	AB1	A	202	215	Right-handed alpha
Helix 11	AB2	A	229	236	Right-handed alpha
Helix 12	AB3	A	237	239	Right-handed 310
Helix 13	AB4	A	286	304	Right-handed alpha
Helix 14	AB5	A	306	316	Right-handed alpha
Helix 15	AB6	B	28	38	Right-handed alpha
Helix 16	AB7	B	50	59	Right-handed alpha
Helix 17	AB8	B	68	73	Right-handed 310
Helix 18	AB9	B	88	97	Right-handed alpha
Helix 19	AC1	B	104	111	Right-handed alpha
Helix 20	AC2	B	112	115	Right-handed 310
Helix 21	AC3	B	125	140	Right-handed alpha
Helix 22	AC4	B	177	181	Right-handed 310
Helix 23	AC5	B	195	200	Right-handed 310
Helix 24	AC6	B	202	215	Right-handed alpha
Helix 25	AC7	B	229	236	Right-handed alpha
Helix 26	AC8	B	237	239	Right-handed 310
Helix 27	AC9	B	286	303	Right-handed alpha
Helix 28	AD1	B	306	316	Right-handed alpha
Helix 29	AD2	C	28	38	Right-handed alpha
Helix 30	AD3	C	50	59	Right-handed alpha
Helix 31	AD4	C	68	73	Right-handed 310
Helix 32	AD5	C	88	97	Right-handed alpha
Helix 33	AD6	C	104	111	Right-handed alpha
Helix 34	AD7	C	112	115	Right-handed 310
Helix 35	AD8	C	125	140	Right-handed alpha
Helix 36	AD9	C	177	181	Right-handed 310
Helix 37	AE1	C	195	200	Right-handed 310
Helix 38	AE2	C	202	215	Right-handed alpha
Helix 39	AE3	C	229	236	Right-handed alpha
Helix 40	AE4	C	237	239	Right-handed 310
Helix 41	AE5	C	286	304	Right-handed alpha
Helix 42	AE6	C	306	316	Right-handed alpha
Helix 43	AE7	D	28	38	Right-handed alpha
Helix 44	AE8	D	50	59	Right-handed alpha
Helix 45	AE9	D	68	73	Right-handed 310
Helix 46	AF1	D	88	97	Right-handed alpha
Helix 47	AF2	D	104	111	Right-handed alpha
Helix 48	AF3	D	112	115	Right-handed 310
Helix 49	AF4	D	125	140	Right-handed alpha
Helix 50	AF5	D	177	181	Right-handed 310
Helix 51	AF6	D	195	200	Right-handed 310
Helix 52	AF7	D	202	215	Right-handed alpha
Helix 53	AF8	D	229	236	Right-handed alpha
Helix 54	AF9	D	237	239	Right-handed 310
Helix 55	AG1	D	286	304	Right-handed alpha
Helix 56	AG2	D	306	316	Right-handed alpha
Helix 57	AG3	E	28	38	Right-handed alpha
Helix 58	AG4	E	50	59	Right-handed alpha
Helix 59	AG5	E	68	73	Right-handed 310
Helix 60	AG6	E	88	97	Right-handed alpha
Helix 61	AG7	E	104	111	Right-handed alpha
Helix 62	AG8	E	112	115	Right-handed 310
Helix 63	AG9	E	125	140	Right-handed alpha
Helix 64	AH1	E	177	181	Right-handed 310
Helix 65	AH2	E	195	200	Right-handed 310
Helix 66	AH3	E	202	215	Right-handed alpha
Helix 67	AH4	E	229	236	Right-handed alpha
Helix 68	AH5	E	237	239	Right-handed 310
Helix 69	AH6	E	286	303	Right-handed alpha
Helix 70	AH7	E	306	316	Right-handed alpha
Helix 71	AH8	F	28	38	Right-handed alpha
Helix 72	AH9	F	50	59	Right-handed alpha
Helix 73	AI1	F	68	73	Right-handed 310
Helix 74	AI2	F	88	97	Right-handed alpha
Helix 75	AI3	F	104	111	Right-handed alpha
Helix 76	AI4	F	112	115	Right-handed 310
Helix 77	AI5	F	125	140	Right-handed alpha
Helix 78	AI6	F	177	181	Right-handed 310
Helix 79	AI7	F	195	200	Right-handed 310
Helix 80	AI8	F	202	215	Right-handed alpha
Helix 81	AI9	F	229	236	Right-handed alpha
Helix 82	AJ1	F	237	239	Right-handed 310
Helix 83	AJ2	F	286	304	Right-handed alpha
Helix 84	AJ3	F	306	316	Right-handed alpha
Helix 85	AJ4	G	25	38	Right-handed alpha
Helix 86	AJ5	G	50	59	Right-handed alpha
Helix 87	AJ6	G	68	73	Right-handed 310
Helix 88	AJ7	G	88	97	Right-handed alpha
Helix 89	AJ8	G	104	111	Right-handed alpha
Helix 90	AJ9	G	112	115	Right-handed 310
Helix 91	AK1	G	125	140	Right-handed alpha
Helix 92	AK2	G	177	181	Right-handed 310
Helix 93	AK3	G	195	200	Right-handed 310
Helix 94	AK4	G	202	216	Right-handed alpha
Helix 95	AK5	G	229	236	Right-handed alpha
Helix 96	AK6	G	237	239	Right-handed 310
Helix 97	AK7	G	286	303	Right-handed alpha
Helix 98	AK8	G	306	316	Right-handed alpha
Helix 99	AK9	H	28	38	Right-handed alpha
Helix 100	AL1	H	50	59	Right-handed alpha
Helix 101	AL2	H	68	73	Right-handed 310
Helix 102	AL3	H	88	97	Right-handed alpha
Helix 103	AL4	H	104	111	Right-handed alpha
Helix 104	AL5	H	112	115	Right-handed 310
Helix 105	AL6	H	125	140	Right-handed alpha
Helix 106	AL7	H	177	181	Right-handed 310
Helix 107	AL8	H	195	200	Right-handed 310
Helix 108	AL9	H	202	215	Right-handed alpha
Helix 109	AM1	H	229	236	Right-handed alpha
Helix 110	AM2	H	237	239	Right-handed 310
Helix 111	AM3	H	286	303	Right-handed alpha
Helix 112	AM4	H	306	316	Right-handed alpha

There are 16 sheets in PDB entry 6X9N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	65	first strand
Strand 2	A	41	46	parallel
Strand 3	A	17	21	parallel
Strand 4	A	77	80	parallel
Strand 5	A	101	103	parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	145	148	anti-parallel
Strand 3	A	166	171	parallel
Strand 4	A	116	121	parallel
Strand 5	A	185	188	parallel
Strand 6	A	222	226	parallel
Strand 7	A	243	247	parallel
Strand 8	A	254	262	parallel
Strand 9	A	265	271	anti-parallel
Strand 10	A	278	282	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	65	first strand
Strand 2	B	41	46	parallel
Strand 3	B	17	21	parallel
Strand 4	B	77	80	parallel
Strand 5	B	101	103	parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	153	first strand
Strand 2	B	145	148	anti-parallel
Strand 3	B	166	171	parallel
Strand 4	B	116	121	parallel
Strand 5	B	185	188	parallel
Strand 6	B	222	226	parallel
Strand 7	B	243	247	parallel
Strand 8	B	254	262	parallel
Strand 9	B	265	271	anti-parallel
Strand 10	B	278	282	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	65	first strand
Strand 2	C	41	46	parallel
Strand 3	C	17	21	parallel
Strand 4	C	77	80	parallel
Strand 5	C	101	103	parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	153	first strand
Strand 2	C	145	148	anti-parallel
Strand 3	C	166	171	parallel
Strand 4	C	116	121	parallel
Strand 5	C	185	188	parallel
Strand 6	C	222	226	parallel
Strand 7	C	243	247	parallel
Strand 8	C	254	262	parallel
Strand 9	C	265	271	anti-parallel
Strand 10	C	278	282	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	65	first strand
Strand 2	D	41	46	parallel
Strand 3	D	17	21	parallel
Strand 4	D	77	80	parallel
Strand 5	D	101	103	parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	145	148	anti-parallel
Strand 3	D	166	171	parallel
Strand 4	D	116	121	parallel
Strand 5	D	185	188	parallel
Strand 6	D	222	226	parallel
Strand 7	D	243	247	parallel
Strand 8	D	254	262	parallel
Strand 9	D	265	271	anti-parallel
Strand 10	D	278	282	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	62	65	first strand
Strand 2	E	41	46	parallel
Strand 3	E	17	21	parallel
Strand 4	E	77	80	parallel
Strand 5	E	101	103	parallel

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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	151	153	first strand
Strand 2	E	145	148	anti-parallel
Strand 3	E	166	171	parallel
Strand 4	E	116	121	parallel
Strand 5	E	185	188	parallel
Strand 6	E	222	226	parallel
Strand 7	E	243	247	parallel
Strand 8	E	254	262	parallel
Strand 9	E	265	271	anti-parallel
Strand 10	E	278	282	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	62	65	first strand
Strand 2	F	41	46	parallel
Strand 3	F	17	21	parallel
Strand 4	F	77	80	parallel
Strand 5	F	101	103	parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	151	153	first strand
Strand 2	F	145	148	anti-parallel
Strand 3	F	166	171	parallel
Strand 4	F	116	121	parallel
Strand 5	F	185	188	parallel
Strand 6	F	222	226	parallel
Strand 7	F	243	247	parallel
Strand 8	F	254	262	parallel
Strand 9	F	265	271	anti-parallel
Strand 10	F	278	282	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	62	65	first strand
Strand 2	G	41	46	parallel
Strand 3	G	17	21	parallel
Strand 4	G	77	80	parallel
Strand 5	G	101	103	parallel

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There are 10 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	151	153	first strand
Strand 2	G	145	148	anti-parallel
Strand 3	G	166	171	parallel
Strand 4	G	116	121	parallel
Strand 5	G	185	188	parallel
Strand 6	G	222	226	parallel
Strand 7	G	243	247	parallel
Strand 8	G	254	262	parallel
Strand 9	G	265	271	anti-parallel
Strand 10	G	278	282	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	62	65	first strand
Strand 2	H	41	46	parallel
Strand 3	H	17	21	parallel
Strand 4	H	77	80	parallel
Strand 5	H	101	103	parallel

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There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	151	153	first strand
Strand 2	H	145	148	anti-parallel
Strand 3	H	166	171	parallel
Strand 4	H	116	121	parallel
Strand 5	H	185	188	parallel
Strand 6	H	222	226	parallel
Strand 7	H	243	247	parallel
Strand 8	H	254	262	parallel
Strand 9	H	265	271	anti-parallel
Strand 10	H	278	282	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6X9N

Analysis of interatomic Contacts of Structural Units in PDB entry:
6X9N