Analysis of interatomic Contacts of Structural Units in PDB entry:
6XA3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XA3 entry

There is 1 chain in PDB entry 6XA3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR -15ASN 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6XA3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
-12 -2Right-handed alpha
Helix 2
AA2
A
0 7Right-handed alpha
Helix 3
AA3
A
13 19Right-handed alpha
Helix 4
AA4
A
19 29Right-handed alpha
Helix 5
AA5
A
55 64Right-handed alpha
Helix 6
AA6
A
99 103Right-handed 310
Helix 7
AA7
A
104 117Right-handed alpha
Helix 8
AA8
A
120 126Right-handed alpha
Helix 9
AA9
A
127 141Right-handed alpha
Helix 10
AB1
A
149 154Right-handed alpha
Helix 11
AB2
A
156 168Right-handed alpha
Helix 12
AB3
A
173 186Right-handed alpha
Helix 13
AB4
A
189 214Right-handed alpha
Helix 14
AB5
A
218 225Right-handed alpha
Helix 15
AB6
A
234 265Right-handed alpha
Helix 16
AB7
A
267 277Right-handed alpha
Helix 17
AB8
A
280 292Right-handed alpha
Helix 18
AB9
A
323 329Right-handed alpha
Helix 19
AC1
A
354 358Right-handed 310
Helix 20
AC2
A
361 379Right-handed alpha
Helix 21
AC3
A
388 392Right-handed 310
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There are 3 sheets in PDB entry 6XA3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 11first strand
Strand 2
A
33 37parallel
Strand 3
A
49 53anti-parallel
Strand 4
A
319 322parallel
Strand 5
A
301 303anti-parallel
Strand 6
A
68 69anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
307 308first strand
Strand 2
A
313 314anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
384 385first strand
Strand 2
A
408 409anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il