Analysis of interatomic Contacts of Structural Units in PDB entry:
6XA9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XA9 entry

There are 6 chains in PDB entry 6XA9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ILE 314
B
 MET 78GLY 156
C
 VAL 2ILE 314
D
 ASP 79GLY 156
E
 ILE 5THR 313
F
 ASP 79GLY 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 6XA9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 32Right-handed alpha
Helix 2
AA2
A
47 51Right-handed 310
Helix 3
AA3
A
61 73Right-handed alpha
Helix 4
AA4
A
78 91Right-handed alpha
Helix 5
AA5
A
110 121Right-handed alpha
Helix 6
AA6
A
129 141Right-handed alpha
Helix 7
AA7
A
144 156Right-handed alpha
Helix 8
AA8
A
164 174Right-handed alpha
Helix 9
AA9
A
201 205Right-handed alpha
Helix 10
AB1
A
212 219Right-handed alpha
Helix 11
AB2
B
103 116Right-handed alpha
Helix 12
AB3
B
136 141Right-handed 310
Helix 13
AB4
C
26 32Right-handed alpha
Helix 14
AB5
C
47 51Right-handed 310
Helix 15
AB6
C
61 73Right-handed alpha
Helix 16
AB7
C
78 91Right-handed alpha
Helix 17
AB8
C
110 121Right-handed alpha
Helix 18
AB9
C
129 141Right-handed alpha
Helix 19
AC1
C
144 156Right-handed alpha
Helix 20
AC2
C
164 175Right-handed alpha
Helix 21
AC3
C
202 204Right-handed 310
Helix 22
AC4
C
212 219Right-handed alpha
Helix 23
AC5
D
103 116Right-handed alpha
Helix 24
AC6
D
118 120Right-handed 310
Helix 25
AC7
D
136 141Right-handed 310
Helix 26
AC8
E
26 32Right-handed alpha
Helix 27
AC9
E
61 73Right-handed alpha
Helix 28
AD1
E
78 91Right-handed alpha
Helix 29
AD2
E
110 121Right-handed alpha
Helix 30
AD3
E
129 141Right-handed alpha
Helix 31
AD4
E
144 156Right-handed alpha
Helix 32
AD5
E
164 175Right-handed alpha
Helix 33
AD6
E
201 205Right-handed alpha
Helix 34
AD7
E
212 219Right-handed alpha
Helix 35
AD8
F
103 116Right-handed alpha
Helix 36
AD9
F
118 120Right-handed 310
Helix 37
AE1
F
136 141Right-handed 310
Back to top of page

There are 18 sheets in PDB entry 6XA9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 22first strand
Strand 2
A
4 10anti-parallel
Strand 3
A
54 57parallel
Strand 4
A
34 36anti-parallel
Strand 5
A
39 40anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
101 102anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 200first strand
Strand 2
A
182 189anti-parallel
Strand 3
A
229 238anti-parallel
Strand 4
A
220 223anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 200first strand
Strand 2
A
182 189anti-parallel
Strand 3
A
229 238anti-parallel
Strand 4
A
309 311anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
241 254parallel
Strand 3
A
295 306anti-parallel
Strand 4
A
260 267anti-parallel
Strand 5
A
270 278anti-parallel
Strand 6
A
282 286anti-parallel
Strand 7
A
289 293anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 98first strand
Strand 2
B
82 87anti-parallel
Strand 3
B
147 152parallel
Strand 4
B
122 126anti-parallel
Strand 5
B
129 130anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 22first strand
Strand 2
C
4 10anti-parallel
Strand 3
C
54 57parallel
Strand 4
C
34 36anti-parallel
Strand 5
C
39 40anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 98first strand
Strand 2
C
101 102anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
193 200first strand
Strand 2
C
182 189anti-parallel
Strand 3
C
229 238anti-parallel
Strand 4
C
220 223anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
193 200first strand
Strand 2
C
182 189anti-parallel
Strand 3
C
229 238anti-parallel
Strand 4
C
309 311anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
206 208first strand
Strand 2
C
241 252parallel
Strand 3
C
297 306anti-parallel
Strand 4
C
260 267anti-parallel
Strand 5
C
270 278anti-parallel
Strand 6
C
282 286anti-parallel
Strand 7
C
289 293anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
93 98first strand
Strand 2
D
82 87anti-parallel
Strand 3
D
147 152parallel
Strand 4
D
122 126anti-parallel
Strand 5
D
129 130anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
17 20first strand
Strand 2
E
6 10anti-parallel
Strand 3
E
54 57parallel
Strand 4
E
34 36anti-parallel
Strand 5
E
39 40anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
97 98first strand
Strand 2
E
101 102anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
193 200first strand
Strand 2
E
182 189anti-parallel
Strand 3
E
229 238anti-parallel
Strand 4
E
220 223anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
193 200first strand
Strand 2
E
182 189anti-parallel
Strand 3
E
229 238anti-parallel
Strand 4
E
309 311anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
206 208first strand
Strand 2
E
241 254parallel
Strand 3
E
295 306anti-parallel
Strand 4
E
260 267anti-parallel
Strand 5
E
270 278anti-parallel
Strand 6
E
282 286anti-parallel
Strand 7
E
289 293anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
93 98first strand
Strand 2
F
82 87anti-parallel
Strand 3
F
147 152parallel
Strand 4
F
122 126anti-parallel
Strand 5
F
129 130anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il