Analysis of interatomic Contacts of Structural Units in PDB entry:
6XB6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XB6 entry

There are 2 chains in PDB entry 6XB6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LEU 241
B
 LYS 3LEU 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6XB6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 44Right-handed 310
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
181 191Right-handed alpha
Helix 4
AA4
B
42 44Right-handed 310
Helix 5
AA5
B
45 53Right-handed alpha
Helix 6
AA6
B
181 191Right-handed alpha
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There are 12 sheets in PDB entry 6XB6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
83 88anti-parallel
Strand 3
A
74 78anti-parallel
Strand 4
A
124 126anti-parallel
Strand 5
A
132 135anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 27first strand
Strand 2
A
30 34anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
62 63anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 100first strand
Strand 2
A
104 114anti-parallel
Strand 3
A
143 145anti-parallel
Strand 4
A
138 140anti-parallel
Strand 5
A
239 240anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 100first strand
Strand 2
A
104 114anti-parallel
Strand 3
A
153 157anti-parallel
Strand 4
B
224 229anti-parallel
Strand 5
B
214 218anti-parallel
Strand 6
B
204 209anti-parallel
Strand 7
B
163 166parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
204 209parallel
Strand 3
A
214 218anti-parallel
Strand 4
A
224 229anti-parallel
Strand 5
B
153 157anti-parallel
Strand 6
B
104 114anti-parallel
Strand 7
B
90 100anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
204 209parallel
Strand 3
A
214 218anti-parallel
Strand 4
A
224 229anti-parallel
Strand 5
B
153 157anti-parallel
Strand 6
B
104 114anti-parallel
Strand 7
B
143 145anti-parallel
Strand 8
B
138 140anti-parallel
Strand 9
B
239 240anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
177 179anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
83 88anti-parallel
Strand 3
B
74 78anti-parallel
Strand 4
B
124 126anti-parallel
Strand 5
B
132 135anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 27first strand
Strand 2
B
30 34anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 40first strand
Strand 2
B
62 63anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
177 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il