Analysis of interatomic Contacts of Structural Units in PDB entry:
6XC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XC0 entry

There are 4 chains in PDB entry 6XC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 175VAL 341
B
 SER 175VAL 341
C
 GLY 23LEU 98
D
 GLY 23GLU 97
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6XC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
175 185Right-handed alpha
Helix 2
AA2
A
213 226Right-handed alpha
Helix 3
AA3
A
237 259Right-handed alpha
Helix 4
AA4
A
261 267Right-handed alpha
Helix 5
AA5
A
270 290Right-handed alpha
Helix 6
AA6
A
292 302Right-handed alpha
Helix 7
AA7
A
303 313Right-handed alpha
Helix 8
AA8
A
314 320Right-handed alpha
Helix 9
AA9
A
320 334Right-handed alpha
Helix 10
AB1
A
336 340Right-handed 310
Helix 11
AB2
B
176 185Right-handed alpha
Helix 12
AB3
B
213 226Right-handed alpha
Helix 13
AB4
B
237 259Right-handed alpha
Helix 14
AB5
B
261 269Right-handed alpha
Helix 15
AB6
B
270 290Right-handed alpha
Helix 16
AB7
B
292 302Right-handed alpha
Helix 17
AB8
B
303 313Right-handed alpha
Helix 18
AB9
B
314 320Right-handed alpha
Helix 19
AC1
B
320 334Right-handed alpha
Helix 20
AC2
B
336 340Right-handed 310
Helix 21
AC3
C
25 35Right-handed alpha
Helix 22
AC4
C
36 56Right-handed alpha
Helix 23
AC5
C
59 71Right-handed alpha
Helix 24
AC6
C
72 74Right-handed 310
Helix 25
AC7
C
75 81Right-handed alpha
Helix 26
AC8
C
86 88Right-handed 310
Helix 27
AC9
C
89 96Right-handed alpha
Helix 28
AD1
D
28 35Right-handed alpha
Helix 29
AD2
D
36 56Right-handed alpha
Helix 30
AD3
D
59 71Right-handed alpha
Helix 31
AD4
D
72 74Right-handed 310
Helix 32
AD5
D
75 81Right-handed alpha
Helix 33
AD6
D
86 88Right-handed 310
Helix 34
AD7
D
89 96Right-handed alpha
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There are 2 sheets in PDB entry 6XC0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 192first strand
Strand 2
A
198 201anti-parallel
Strand 3
A
204 205anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 192first strand
Strand 2
B
198 201anti-parallel
Strand 3
B
204 205anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il