Analysis of interatomic Contacts of Structural Units in PDB entry:
6XCS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XCS entry

There are 2 chains in PDB entry 6XCS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 10ASP 417
B
 MSE 11LEU 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6XCS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 21Right-handed 310
Helix 2
AA2
A
26 32Right-handed 310
Helix 3
AA3
A
33 38Right-handed alpha
Helix 4
AA4
A
52 71Right-handed alpha
Helix 5
AA5
A
80 93Right-handed alpha
Helix 6
AA6
A
99 103Right-handed 310
Helix 7
AA7
A
105 127Right-handed alpha
Helix 8
AA8
A
143 158Right-handed alpha
Helix 9
AA9
A
161 172Right-handed alpha
Helix 10
AB1
A
179 188Right-handed alpha
Helix 11
AB2
A
191 217Right-handed alpha
Helix 12
AB3
A
221 249Right-handed alpha
Helix 13
AB4
A
258 276Right-handed alpha
Helix 14
AB5
A
286 291Right-handed alpha
Helix 15
AB6
A
305 312Right-handed alpha
Helix 16
AB7
A
358 368Right-handed alpha
Helix 17
AB8
A
396 401Right-handed alpha
Helix 18
AB9
B
17 21Right-handed 310
Helix 19
AC1
B
26 32Right-handed 310
Helix 20
AC2
B
33 38Right-handed alpha
Helix 21
AC3
B
52 71Right-handed alpha
Helix 22
AC4
B
80 93Right-handed alpha
Helix 23
AC5
B
99 103Right-handed 310
Helix 24
AC6
B
105 127Right-handed alpha
Helix 25
AC7
B
143 158Right-handed alpha
Helix 26
AC8
B
161 172Right-handed alpha
Helix 27
AC9
B
179 188Right-handed alpha
Helix 28
AD1
B
191 217Right-handed alpha
Helix 29
AD2
B
221 249Right-handed alpha
Helix 30
AD3
B
258 276Right-handed alpha
Helix 31
AD4
B
286 291Right-handed alpha
Helix 32
AD5
B
305 312Right-handed alpha
Helix 33
AD6
B
358 368Right-handed alpha
Helix 34
AD7
B
396 401Right-handed alpha
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There are 6 sheets in PDB entry 6XCS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
373 376anti-parallel
Strand 3
A
403 407anti-parallel
Strand 4
A
318 325parallel
Strand 5
A
42 45parallel
Strand 6
A
281 284parallel
Strand 7
A
74 77parallel
Strand 8
A
131 134parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 334first strand
Strand 2
A
345 350anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 388first strand
Strand 2
A
391 394anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
373 376anti-parallel
Strand 3
B
403 407anti-parallel
Strand 4
B
318 325parallel
Strand 5
B
42 45parallel
Strand 6
B
281 284parallel
Strand 7
B
74 77parallel
Strand 8
B
131 134parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 334first strand
Strand 2
B
345 350anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
385 388first strand
Strand 2
B
391 394anti-parallel
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