Analysis of interatomic Contacts of Structural Units in PDB entry:
6XCV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XCV entry

There are 2 chains in PDB entry 6XCV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4LEU 471
B
 VAL 4LEU 471
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6XCV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 26Right-handed alpha
Helix 2
AA2
A
27 31Right-handed 310
Helix 3
AA3
A
48 55Right-handed 310
Helix 4
AA4
A
62 66Right-handed 310
Helix 5
AA5
A
68 84Right-handed alpha
Helix 6
AA6
A
97 105Right-handed alpha
Helix 7
AA7
A
106 126Right-handed alpha
Helix 8
AA8
A
127 132Right-handed alpha
Helix 9
AA9
A
139 147Right-handed alpha
Helix 10
AB1
A
148 150Right-handed 310
Helix 11
AB2
A
159 167Right-handed alpha
Helix 12
AB3
A
170 182Right-handed alpha
Helix 13
AB4
A
182 188Right-handed alpha
Helix 14
AB5
A
190 195Right-handed alpha
Helix 15
AB6
A
203 216Right-handed alpha
Helix 16
AB7
A
217 223Right-handed 310
Helix 17
AB8
A
224 236Right-handed alpha
Helix 18
AB9
A
245 249Right-handed 310
Helix 19
AC1
A
250 266Right-handed alpha
Helix 20
AC2
A
269 300Right-handed alpha
Helix 21
AC3
A
301 303Right-handed 310
Helix 22
AC4
A
305 310Right-handed alpha
Helix 23
AC5
A
318 326Right-handed alpha
Helix 24
AC6
A
326 335Right-handed alpha
Helix 25
AC7
A
338 369Right-handed alpha
Helix 26
AC8
A
369 386Right-handed alpha
Helix 27
AC9
A
466 471Right-handed 310
Helix 28
AD1
B
13 26Right-handed alpha
Helix 29
AD2
B
27 31Right-handed 310
Helix 30
AD3
B
48 55Right-handed 310
Helix 31
AD4
B
62 66Right-handed 310
Helix 32
AD5
B
68 84Right-handed alpha
Helix 33
AD6
B
97 105Right-handed alpha
Helix 34
AD7
B
106 126Right-handed alpha
Helix 35
AD8
B
127 132Right-handed alpha
Helix 36
AD9
B
139 149Right-handed alpha
Helix 37
AE1
B
159 167Right-handed alpha
Helix 38
AE2
B
170 182Right-handed alpha
Helix 39
AE3
B
182 187Right-handed alpha
Helix 40
AE4
B
190 195Right-handed alpha
Helix 41
AE5
B
202 216Right-handed alpha
Helix 42
AE6
B
217 220Right-handed 310
Helix 43
AE7
B
224 236Right-handed alpha
Helix 44
AE8
B
245 249Right-handed 310
Helix 45
AE9
B
250 266Right-handed alpha
Helix 46
AF1
B
269 300Right-handed alpha
Helix 47
AF2
B
301 303Right-handed 310
Helix 48
AF3
B
305 310Right-handed alpha
Helix 49
AF4
B
318 325Right-handed alpha
Helix 50
AF5
B
326 335Right-handed alpha
Helix 51
AF6
B
338 369Right-handed alpha
Helix 52
AF7
B
369 376Right-handed alpha
Helix 53
AF8
B
376 385Right-handed alpha
Helix 54
AF9
B
466 471Right-handed 310
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There are 6 sheets in PDB entry 6XCV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
B
199 200parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 200first strand
Strand 2
B
87 88parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 399first strand
Strand 2
A
456 465anti-parallel
Strand 3
A
412 419anti-parallel
Strand 4
A
439 442anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 407first strand
Strand 2
A
448 452anti-parallel
Strand 3
A
422 427anti-parallel
Strand 4
A
430 434anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 399first strand
Strand 2
B
456 465anti-parallel
Strand 3
B
412 419anti-parallel
Strand 4
B
439 442anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
404 407first strand
Strand 2
B
448 452anti-parallel
Strand 3
B
421 427anti-parallel
Strand 4
B
430 435anti-parallel
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