Analysis of interatomic Contacts of Structural Units in PDB entry:
6XDB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XDB entry

There is 1 chain in PDB entry 6XDB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 561GLU 964
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6XDB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
602 604Right-handed 310
Helix 2
AA2
A
605 619Right-handed alpha
Helix 3
AA3
A
649 656Right-handed alpha
Helix 4
AA4
A
657 661Right-handed 310
Helix 5
AA5
A
663 682Right-handed alpha
Helix 6
AA6
A
690 692Right-handed 310
Helix 7
AA7
A
739 743Right-handed 310
Helix 8
AA8
A
753 769Right-handed alpha
Helix 9
AA9
A
777 779Right-handed 310
Helix 10
AB1
A
780 788Right-handed alpha
Helix 11
AB2
A
799 813Right-handed alpha
Helix 12
AB3
A
816 820Right-handed 310
Helix 13
AB4
A
822 829Right-handed alpha
Helix 14
AB5
A
830 833Right-handed 310
Helix 15
AB6
A
834 850Right-handed alpha
Helix 16
AB7
A
856 864Right-handed alpha
Helix 17
AB8
A
865 870Right-handed alpha
Helix 18
AB9
A
873 878Right-handed 310
Helix 19
AC1
A
879 887Right-handed alpha
Helix 20
AC2
A
896 910Right-handed alpha
Helix 21
AC3
A
915 923Right-handed alpha
Helix 22
AC4
A
926 937Right-handed alpha
Helix 23
AC5
A
939 948Right-handed alpha
Helix 24
AC6
A
949 952Right-handed 310
Helix 25
AC7
A
954 958Right-handed 310
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There are 4 sheets in PDB entry 6XDB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 566first strand
Strand 2
A
569 571anti-parallel
Strand 3
A
584 591anti-parallel
Strand 4
A
576 580anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 566first strand
Strand 2
A
569 571anti-parallel
Strand 3
A
584 591anti-parallel
Strand 4
A
594 601anti-parallel
Strand 5
A
638 643anti-parallel
Strand 6
A
628 633anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
645 648first strand
Strand 2
A
694 697anti-parallel
Strand 3
A
707 709anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
684 685first strand
Strand 2
A
716 717anti-parallel
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