Analysis of interatomic Contacts of Structural Units in PDB entry:
6XE9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XE9 entry

There are 6 chains in PDB entry 6XE9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 24	GLU 1675
B	PHE 3	GLY 150
C	PHE 25	LYS 167
M	LEU 24	GLU 1676
N	PHE 3	GLY 150
O	PHE 25	LYS 167

There are111 helices in PDB entry 6XE9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	31	Right-handed alpha
Helix 2	AA2	A	80	84	Right-handed 310
Helix 3	AA3	A	88	92	Right-handed 310
Helix 4	AA4	A	96	110	Right-handed alpha
Helix 5	AA5	A	134	142	Right-handed alpha
Helix 6	AA6	A	152	168	Right-handed alpha
Helix 7	AA7	A	184	198	Right-handed alpha
Helix 8	AA8	A	218	233	Right-handed alpha
Helix 9	AA9	A	273	279	Right-handed alpha
Helix 10	AB1	A	287	295	Right-handed alpha
Helix 11	AB2	A	298	305	Right-handed alpha
Helix 12	AB3	A	327	343	Right-handed alpha
Helix 13	AB4	A	345	362	Right-handed alpha
Helix 14	AB5	A	363	365	Right-handed 310
Helix 15	AB6	A	381	392	Right-handed alpha
Helix 16	AB7	A	394	404	Right-handed alpha
Helix 17	AB8	A	419	448	Right-handed alpha
Helix 18	AB9	A	476	508	Right-handed alpha
Helix 19	AC1	A	521	530	Right-handed alpha
Helix 20	AC2	A	536	546	Right-handed alpha
Helix 21	AC3	A	551	563	Right-handed alpha
Helix 22	AC4	A	575	578	Right-handed 310
Helix 23	AC5	A	596	603	Right-handed alpha
Helix 24	AC6	A	606	615	Right-handed alpha
Helix 25	AC7	A	618	625	Right-handed alpha
Helix 26	AC8	A	658	676	Right-handed alpha
Helix 27	AC9	A	698	708	Right-handed alpha
Helix 28	AD1	A	709	720	Right-handed alpha
Helix 29	AD2	A	727	735	Right-handed alpha
Helix 30	AD3	A	748	761	Right-handed alpha
Helix 31	AD4	A	763	765	Right-handed 310
Helix 32	AD5	A	779	836	Right-handed alpha
Helix 33	AD6	A	839	848	Right-handed alpha
Helix 34	AD7	A	852	953	Right-handed alpha
Helix 35	AD8	A	1398	1534	Right-handed alpha
Helix 36	AD9	A	1535	1627	Right-handed alpha
Helix 37	AE1	A	1627	1643	Right-handed alpha
Helix 38	AE2	A	1644	1675	Right-handed alpha
Helix 39	AE3	B	7	18	Right-handed alpha
Helix 40	AE4	B	28	38	Right-handed alpha
Helix 41	AE5	B	43	51	Right-handed alpha
Helix 42	AE6	B	55	62	Right-handed alpha
Helix 43	AE7	B	68	78	Right-handed alpha
Helix 44	AE8	B	84	96	Right-handed alpha
Helix 45	AE9	B	105	114	Right-handed alpha
Helix 46	AF1	B	120	129	Right-handed alpha
Helix 47	AF2	B	139	150	Right-handed alpha
Helix 48	AF3	C	26	41	Right-handed alpha
Helix 49	AF4	C	49	61	Right-handed alpha
Helix 50	AF5	C	65	73	Right-handed alpha
Helix 51	AF6	C	81	94	Right-handed alpha
Helix 52	AF7	C	98	110	Right-handed alpha
Helix 53	AF8	C	119	127	Right-handed alpha
Helix 54	AF9	C	134	144	Right-handed alpha
Helix 55	AG1	C	157	163	Right-handed alpha
Helix 56	AG2	M	28	32	Right-handed 310
Helix 57	AG3	M	71	75	Right-handed 310
Helix 58	AG4	M	80	84	Right-handed 310
Helix 59	AG5	M	88	92	Right-handed 310
Helix 60	AG6	M	96	110	Right-handed alpha
Helix 61	AG7	M	134	141	Right-handed alpha
Helix 62	AG8	M	152	168	Right-handed alpha
Helix 63	AG9	M	184	198	Right-handed alpha
Helix 64	AH1	M	218	234	Right-handed alpha
Helix 65	AH2	M	273	279	Right-handed alpha
Helix 66	AH3	M	287	296	Right-handed alpha
Helix 67	AH4	M	298	302	Right-handed 310
Helix 68	AH5	M	330	342	Right-handed alpha
Helix 69	AH6	M	345	358	Right-handed alpha
Helix 70	AH7	M	359	365	Right-handed alpha
Helix 71	AH8	M	386	391	Right-handed 310
Helix 72	AH9	M	394	404	Right-handed alpha
Helix 73	AI1	M	420	451	Right-handed alpha
Helix 74	AI2	M	476	508	Right-handed alpha
Helix 75	AI3	M	521	530	Right-handed alpha
Helix 76	AI4	M	536	546	Right-handed alpha
Helix 77	AI5	M	551	564	Right-handed alpha
Helix 78	AI6	M	596	603	Right-handed alpha
Helix 79	AI7	M	611	615	Right-handed 310
Helix 80	AI8	M	619	625	Right-handed alpha
Helix 81	AI9	M	658	676	Right-handed alpha
Helix 82	AJ1	M	697	709	Right-handed alpha
Helix 83	AJ2	M	710	720	Right-handed alpha
Helix 84	AJ3	M	727	735	Right-handed alpha
Helix 85	AJ4	M	748	761	Right-handed alpha
Helix 86	AJ5	M	763	765	Right-handed 310
Helix 87	AJ6	M	781	822	Right-handed alpha
Helix 88	AJ7	M	824	837	Right-handed alpha
Helix 89	AJ8	M	838	852	Right-handed alpha
Helix 90	AJ9	M	852	890	Right-handed alpha
Helix 91	AK1	M	892	954	Right-handed alpha
Helix 92	AK2	M	1398	1531	Right-handed alpha
Helix 93	AK3	M	1535	1611	Right-handed alpha
Helix 94	AK4	M	1619	1676	Right-handed alpha
Helix 95	AK5	N	7	18	Right-handed alpha
Helix 96	AK6	N	28	38	Right-handed alpha
Helix 97	AK7	N	43	51	Right-handed alpha
Helix 98	AK8	N	55	62	Right-handed alpha
Helix 99	AK9	N	68	78	Right-handed alpha
Helix 100	AL1	N	84	96	Right-handed alpha
Helix 101	AL2	N	105	114	Right-handed alpha
Helix 102	AL3	N	120	129	Right-handed alpha
Helix 103	AL4	N	139	150	Right-handed alpha
Helix 104	AL5	O	26	41	Right-handed alpha
Helix 105	AL6	O	49	61	Right-handed alpha
Helix 106	AL7	O	65	73	Right-handed alpha
Helix 107	AL8	O	81	94	Right-handed alpha
Helix 108	AL9	O	98	110	Right-handed alpha
Helix 109	AM1	O	119	127	Right-handed alpha
Helix 110	AM2	O	134	144	Right-handed alpha
Helix 111	AM3	O	157	163	Right-handed alpha

There are 17 sheets in PDB entry 6XE9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	38	first strand
Strand 2	A	44	53	anti-parallel
Strand 3	A	56	60	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	117	first strand
Strand 2	A	120	123	anti-parallel
Strand 3	A	681	684	parallel
Strand 4	A	171	175	parallel
Strand 5	A	461	465	parallel
Strand 6	A	250	256	anti-parallel
Strand 7	A	262	269	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	406	409	first strand
Strand 2	A	412	415	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	570	first strand
Strand 2	A	580	585	anti-parallel
Strand 3	A	588	593	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	725	726	first strand
Strand 2	A	773	776	anti-parallel
Strand 3	A	767	768	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	27	first strand
Strand 2	B	63	64	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	104	first strand
Strand 2	B	137	138	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	118	first strand
Strand 2	C	152	154	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	35	36	first strand
Strand 2	M	46	47	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	52	53	first strand
Strand 2	M	56	59	anti-parallel
Strand 3	M	68	70	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	121	123	first strand
Strand 2	M	681	684	parallel
Strand 3	M	172	176	parallel
Strand 4	M	461	465	parallel
Strand 5	M	250	256	anti-parallel
Strand 6	M	262	268	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	236	237	first strand
Strand 2	M	245	246	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	569	570	first strand
Strand 2	M	580	583	anti-parallel
Strand 3	M	590	593	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	723	726	first strand
Strand 2	M	773	776	anti-parallel
Strand 3	M	767	769	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	26	27	first strand
Strand 2	N	63	64	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	103	104	first strand
Strand 2	N	137	138	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	116	118	first strand
Strand 2	O	152	154	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XE9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XE9