Analysis of interatomic Contacts of Structural Units in PDB entry:
6XEO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XEO entry

There are 3 chains in PDB entry 6XEO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 5ILE 1147
B
 A 4 C 21
C
 G 22 T 39
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6XEO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
48 62Right-handed alpha
Helix 3
AA3
A
84 96Right-handed alpha
Helix 4
AA4
A
109 115Right-handed alpha
Helix 5
AA5
A
120 125Right-handed alpha
Helix 6
AA6
A
137 149Right-handed alpha
Helix 7
AA7
A
220 235Right-handed alpha
Helix 8
AA8
A
243 250Right-handed alpha
Helix 9
AA9
A
255 264Right-handed 310
Helix 10
AB1
A
271 275Right-handed 310
Helix 11
AB2
A
287 307Right-handed alpha
Helix 12
AB3
A
316 321Right-handed alpha
Helix 13
AB4
A
323 332Right-handed alpha
Helix 14
AB5
A
371 379Right-handed alpha
Helix 15
AB6
A
391 401Right-handed alpha
Helix 16
AB7
A
445 451Right-handed alpha
Helix 17
AB8
A
513 517Right-handed 310
Helix 18
AB9
A
522 527Right-handed 310
Helix 19
AC1
A
548 575Right-handed alpha
Helix 20
AC2
A
586 595Right-handed alpha
Helix 21
AC3
A
602 618Right-handed alpha
Helix 22
AC4
A
636 638Right-handed 310
Helix 23
AC5
A
639 648Right-handed alpha
Helix 24
AC6
A
659 673Right-handed alpha
Helix 25
AC7
A
688 702Right-handed alpha
Helix 26
AC8
A
736 744Right-handed alpha
Helix 27
AC9
A
761 771Right-handed alpha
Helix 28
AD1
A
794 806Right-handed alpha
Helix 29
AD2
A
821 833Right-handed alpha
Helix 30
AD3
A
846 860Right-handed alpha
Helix 31
AD4
A
892 900Right-handed alpha
Helix 32
AD5
A
923 935Right-handed alpha
Helix 33
AD6
A
942 954Right-handed alpha
Helix 34
AD7
A
960 971Right-handed alpha
Helix 35
AD8
A
971 989Right-handed alpha
Helix 36
AD9
A
1019 1033Right-handed alpha
Helix 37
AE1
A
1035 1050Right-handed alpha
Helix 38
AE2
A
1054 1074Right-handed alpha
Helix 39
AE3
A
1097 1107Right-handed alpha
Helix 40
AE4
A
1127 1145Right-handed alpha
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There are 9 sheets in PDB entry 6XEO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
209 210anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 165first strand
Strand 2
A
168 170anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
193 196anti-parallel
Strand 3
A
201 205anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 283first strand
Strand 2
A
336 337parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
434 436anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 521first strand
Strand 2
A
505 512anti-parallel
Strand 3
A
489 500anti-parallel
Strand 4
A
482 485anti-parallel
Strand 5
A
529 531anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
652 654first strand
Strand 2
A
706 708parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 788first strand
Strand 2
A
910 912parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1077 1081first strand
Strand 2
A
1084 1088anti-parallel
Strand 3
A
1118 1121anti-parallel
Strand 4
A
1112 1114anti-parallel
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