Analysis of interatomic Contacts of Structural Units in PDB entry:
6XES

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XES entry

There are 3 chains in PDB entry 6XES (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 437
B	MET 1	ALA 430
C	MET 1	VAL 435

There are 85 helices in PDB entry 6XES. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	29	Right-handed alpha
Helix 2	AA2	A	47	51	Right-handed 310
Helix 3	AA3	A	71	81	Right-handed alpha
Helix 4	AA4	A	83	87	Right-handed 310
Helix 5	AA5	A	88	90	Right-handed 310
Helix 6	AA6	A	102	108	Right-handed alpha
Helix 7	AA7	A	110	127	Right-handed alpha
Helix 8	AA8	A	143	161	Right-handed alpha
Helix 9	AA9	A	182	195	Right-handed alpha
Helix 10	AB1	A	196	198	Right-handed 310
Helix 11	AB2	A	206	218	Right-handed alpha
Helix 12	AB3	A	223	244	Right-handed alpha
Helix 13	AB4	A	252	260	Right-handed alpha
Helix 14	AB5	A	287	295	Right-handed alpha
Helix 15	AB6	A	296	301	Right-handed 310
Helix 16	AB7	A	306	310	Right-handed 310
Helix 17	AB8	A	324	339	Right-handed alpha
Helix 18	AB9	A	384	401	Right-handed alpha
Helix 19	AC1	A	404	410	Right-handed alpha
Helix 20	AC2	A	414	436	Right-handed alpha
Helix 21	AC3	B	10	28	Right-handed alpha
Helix 22	AC4	B	40	44	Right-handed 310
Helix 23	AC5	B	46	49	Right-handed 310
Helix 24	AC6	B	69	79	Right-handed alpha
Helix 25	AC7	B	81	85	Right-handed 310
Helix 26	AC8	B	86	88	Right-handed 310
Helix 27	AC9	B	100	106	Right-handed alpha
Helix 28	AD1	B	106	126	Right-handed alpha
Helix 29	AD2	B	142	159	Right-handed alpha
Helix 30	AD3	B	172	176	Right-handed 310
Helix 31	AD4	B	180	196	Right-handed alpha
Helix 32	AD5	B	204	214	Right-handed alpha
Helix 33	AD6	B	221	242	Right-handed alpha
Helix 34	AD7	B	249	258	Right-handed alpha
Helix 35	AD8	B	285	293	Right-handed alpha
Helix 36	AD9	B	294	299	Right-handed 310
Helix 37	AE1	B	304	308	Right-handed 310
Helix 38	AE2	B	322	337	Right-handed alpha
Helix 39	AE3	B	338	341	Right-handed 310
Helix 40	AE4	B	374	390	Right-handed alpha
Helix 41	AE5	B	395	400	Right-handed alpha
Helix 42	AE6	B	404	428	Right-handed alpha
Helix 43	AE7	C	10	29	Right-handed alpha
Helix 44	AE8	C	47	51	Right-handed 310
Helix 45	AE9	C	72	81	Right-handed alpha
Helix 46	AF1	C	88	90	Right-handed 310
Helix 47	AF2	C	102	108	Right-handed alpha
Helix 48	AF3	C	110	113	Right-handed 310
Helix 49	AF4	C	114	127	Right-handed alpha
Helix 50	AF5	C	143	162	Right-handed alpha
Helix 51	AF6	C	182	195	Right-handed alpha
Helix 52	AF7	C	196	198	Right-handed 310
Helix 53	AF8	C	206	216	Right-handed alpha
Helix 54	AF9	C	223	244	Right-handed alpha
Helix 55	AG1	C	251	260	Right-handed alpha
Helix 56	AG2	C	287	295	Right-handed alpha
Helix 57	AG3	C	296	301	Right-handed 310
Helix 58	AG4	C	306	310	Right-handed 310
Helix 59	AG5	C	324	337	Right-handed alpha
Helix 60	AG6	C	384	400	Right-handed alpha
Helix 61	AG7	C	404	410	Right-handed alpha
Helix 62	AG8	C	414	437	Right-handed alpha
Helix 63	AG9	D	10	28	Right-handed alpha
Helix 64	AH1	D	41	46	Right-handed alpha
Helix 65	AH2	D	47	49	Right-handed 310
Helix 66	AH3	D	70	79	Right-handed alpha
Helix 67	AH4	D	81	85	Right-handed 310
Helix 68	AH5	D	86	88	Right-handed 310
Helix 69	AH6	D	100	106	Right-handed alpha
Helix 70	AH7	D	107	126	Right-handed alpha
Helix 71	AH8	D	142	159	Right-handed alpha
Helix 72	AH9	D	180	196	Right-handed alpha
Helix 73	AI1	D	204	214	Right-handed alpha
Helix 74	AI2	D	221	237	Right-handed alpha
Helix 75	AI3	D	237	242	Right-handed alpha
Helix 76	AI4	D	249	258	Right-handed alpha
Helix 77	AI5	D	285	294	Right-handed alpha
Helix 78	AI6	D	295	299	Right-handed 310
Helix 79	AI7	D	304	308	Right-handed 310
Helix 80	AI8	D	322	337	Right-handed alpha
Helix 81	AI9	D	338	341	Right-handed 310
Helix 82	AJ1	D	374	390	Right-handed alpha
Helix 83	AJ2	D	394	400	Right-handed alpha
Helix 84	AJ3	D	404	428	Right-handed alpha
Helix 85	AJ4	E	46	140	Right-handed alpha

There are 10 sheets in PDB entry 6XES. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	65	69	parallel
Strand 3	A	4	9	parallel
Strand 4	A	134	140	parallel
Strand 5	A	165	172	parallel
Strand 6	A	200	205	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	61	63	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	273	first strand
Strand 2	A	373	381	anti-parallel
Strand 3	A	312	321	anti-parallel
Strand 4	A	349	356	parallel
Strand 5	E	17	25	anti-parallel
Strand 6	E	7	14	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	63	67	parallel
Strand 3	B	3	9	parallel
Strand 4	B	130	138	parallel
Strand 5	B	163	170	parallel
Strand 6	B	198	203	parallel
Strand 7	B	265	271	parallel
Strand 8	B	364	371	anti-parallel
Strand 9	B	310	318	anti-parallel
Strand 10	B	349	354	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	53	first strand
Strand 2	B	59	61	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	65	69	parallel
Strand 3	C	4	9	parallel
Strand 4	C	134	140	parallel
Strand 5	C	165	172	parallel
Strand 6	C	200	205	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	61	63	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	273	first strand
Strand 2	C	373	381	anti-parallel
Strand 3	C	312	321	anti-parallel
Strand 4	C	351	356	parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	92	first strand
Strand 2	D	63	67	parallel
Strand 3	D	3	9	parallel
Strand 4	D	130	138	parallel
Strand 5	D	163	170	parallel
Strand 6	D	198	203	parallel
Strand 7	D	265	271	parallel
Strand 8	D	363	371	anti-parallel
Strand 9	D	310	319	anti-parallel
Strand 10	D	349	354	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	58	61	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XES

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XES