Analysis of interatomic Contacts of Structural Units in PDB entry:
6XF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XF1 entry

There are 4 chains in PDB entry 6XF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1420ASP 1649
B
 VAL 18LEU 334
C
 ASP 1424ASP 1649
D
 SER 14LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6XF1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1421 1452Right-handed alpha
Helix 2
AA2
A
1459 1493Right-handed alpha
Helix 3
AA3
A
1500 1557Right-handed alpha
Helix 4
AA4
A
1561 1565Right-handed 310
Helix 5
AA5
A
1566 1587Right-handed alpha
Helix 6
AA6
A
1587 1607Right-handed alpha
Helix 7
AA7
A
1616 1647Right-handed alpha
Helix 8
AA8
B
27 31Right-handed 310
Helix 9
AA9
B
54 63Right-handed alpha
Helix 10
AB1
B
67 69Right-handed 310
Helix 11
AB2
B
86 94Right-handed alpha
Helix 12
AB3
B
98 104Right-handed 310
Helix 13
AB4
B
115 130Right-handed alpha
Helix 14
AB5
B
131 149Right-handed alpha
Helix 15
AB6
B
151 159Right-handed alpha
Helix 16
AB7
B
160 170Right-handed alpha
Helix 17
AB8
B
173 190Right-handed alpha
Helix 18
AB9
B
190 200Right-handed alpha
Helix 19
AC1
B
200 211Right-handed alpha
Helix 20
AC2
B
215 233Right-handed alpha
Helix 21
AC3
B
236 252Right-handed alpha
Helix 22
AC4
B
256 264Right-handed alpha
Helix 23
AC5
B
270 286Right-handed alpha
Helix 24
AC6
B
290 304Right-handed alpha
Helix 25
AC7
B
305 316Right-handed alpha
Helix 26
AC8
B
320 334Right-handed alpha
Helix 27
AC9
C
1425 1452Right-handed alpha
Helix 28
AD1
C
1459 1480Right-handed alpha
Helix 29
AD2
C
1480 1493Right-handed alpha
Helix 30
AD3
C
1501 1556Right-handed alpha
Helix 31
AD4
C
1561 1565Right-handed 310
Helix 32
AD5
C
1566 1587Right-handed alpha
Helix 33
AD6
C
1587 1607Right-handed alpha
Helix 34
AD7
C
1616 1647Right-handed alpha
Helix 35
AD8
D
51 53Right-handed 310
Helix 36
AD9
D
54 63Right-handed alpha
Helix 37
AE1
D
67 69Right-handed 310
Helix 38
AE2
D
91 94Right-handed 310
Helix 39
AE3
D
95 104Right-handed alpha
Helix 40
AE4
D
115 130Right-handed alpha
Helix 41
AE5
D
132 149Right-handed alpha
Helix 42
AE6
D
151 159Right-handed alpha
Helix 43
AE7
D
160 170Right-handed alpha
Helix 44
AE8
D
173 189Right-handed alpha
Helix 45
AE9
D
190 200Right-handed alpha
Helix 46
AF1
D
200 210Right-handed alpha
Helix 47
AF2
D
211 213Right-handed 310
Helix 48
AF3
D
215 233Right-handed alpha
Helix 49
AF4
D
236 252Right-handed alpha
Helix 50
AF5
D
256 264Right-handed alpha
Helix 51
AF6
D
270 286Right-handed alpha
Helix 52
AF7
D
290 305Right-handed alpha
Helix 53
AF8
D
305 316Right-handed alpha
Helix 54
AF9
D
320 334Right-handed alpha
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There are 2 sheets in PDB entry 6XF1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
111 114parallel
Strand 3
B
71 74anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
42 44first strand
Strand 2
D
17 22anti-parallel
Strand 3
D
109 114parallel
Strand 4
D
71 75anti-parallel
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