Analysis of interatomic Contacts of Structural Units in PDB entry:
6XF7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XF7 entry

There are 2 chains in PDB entry 6XF7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ASN 241	PRO 1275
C	GLN 217	PRO 1275

There are 78 helices in PDB entry 6XF7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	241	249	Right-handed alpha
Helix 2	AA2	B	286	291	Right-handed alpha
Helix 3	AA3	B	331	336	Right-handed alpha
Helix 4	AA4	B	353	369	Right-handed alpha
Helix 5	AA5	B	399	407	Right-handed alpha
Helix 6	AA6	B	408	411	Right-handed 310
Helix 7	AA7	B	417	426	Right-handed alpha
Helix 8	AA8	B	455	473	Right-handed alpha
Helix 9	AA9	B	475	488	Right-handed alpha
Helix 10	AB1	B	510	526	Right-handed alpha
Helix 11	AB2	B	528	530	Right-handed 310
Helix 12	AB3	B	531	547	Right-handed alpha
Helix 13	AB4	B	553	563	Right-handed alpha
Helix 14	AB5	B	572	582	Right-handed alpha
Helix 15	AB6	B	589	600	Right-handed alpha
Helix 16	AB7	B	610	613	Right-handed 310
Helix 17	AB8	B	622	639	Right-handed alpha
Helix 18	AB9	B	643	657	Right-handed alpha
Helix 19	AC1	B	674	678	Right-handed 310
Helix 20	AC2	B	685	690	Right-handed alpha
Helix 21	AC3	B	699	713	Right-handed alpha
Helix 22	AC4	B	759	777	Right-handed alpha
Helix 23	AC5	B	786	802	Right-handed alpha
Helix 24	AC6	B	806	813	Right-handed alpha
Helix 25	AC7	B	813	826	Right-handed alpha
Helix 26	AC8	B	839	842	Right-handed 310
Helix 27	AC9	B	859	868	Right-handed alpha
Helix 28	AD1	B	878	888	Right-handed alpha
Helix 29	AD2	B	896	909	Right-handed alpha
Helix 30	AD3	B	912	939	Right-handed alpha
Helix 31	AD4	B	958	978	Right-handed alpha
Helix 32	AD5	B	984	989	Right-handed alpha
Helix 33	AD6	B	1018	1034	Right-handed alpha
Helix 34	AD7	B	1035	1038	Right-handed 310
Helix 35	AD8	B	1062	1066	Right-handed 310
Helix 36	AD9	B	1111	1118	Right-handed alpha
Helix 37	AE1	B	1118	1133	Right-handed alpha
Helix 38	AE2	B	1159	1170	Right-handed alpha
Helix 39	AE3	B	1229	1231	Right-handed 310
Helix 40	AE4	B	1232	1237	Right-handed alpha
Helix 41	AE5	B	1266	1271	Right-handed alpha
Helix 42	AE6	C	331	336	Right-handed alpha
Helix 43	AE7	C	350	352	Right-handed 310
Helix 44	AE8	C	353	369	Right-handed alpha
Helix 45	AE9	C	383	387	Right-handed 310
Helix 46	AF1	C	398	407	Right-handed alpha
Helix 47	AF2	C	417	426	Right-handed alpha
Helix 48	AF3	C	455	473	Right-handed alpha
Helix 49	AF4	C	475	488	Right-handed alpha
Helix 50	AF5	C	510	526	Right-handed alpha
Helix 51	AF6	C	528	547	Right-handed alpha
Helix 52	AF7	C	552	561	Right-handed alpha
Helix 53	AF8	C	572	582	Right-handed alpha
Helix 54	AF9	C	588	600	Right-handed alpha
Helix 55	AG1	C	609	613	Right-handed 310
Helix 56	AG2	C	614	618	Right-handed 310
Helix 57	AG3	C	622	639	Right-handed alpha
Helix 58	AG4	C	643	657	Right-handed alpha
Helix 59	AG5	C	674	678	Right-handed 310
Helix 60	AG6	C	680	684	Right-handed 310
Helix 61	AG7	C	685	690	Right-handed alpha
Helix 62	AG8	C	699	713	Right-handed alpha
Helix 63	AG9	C	759	778	Right-handed alpha
Helix 64	AH1	C	789	802	Right-handed alpha
Helix 65	AH2	C	806	813	Right-handed alpha
Helix 66	AH3	C	813	826	Right-handed alpha
Helix 67	AH4	C	863	868	Right-handed 310
Helix 68	AH5	C	878	888	Right-handed alpha
Helix 69	AH6	C	896	910	Right-handed alpha
Helix 70	AH7	C	913	939	Right-handed alpha
Helix 71	AH8	C	958	977	Right-handed alpha
Helix 72	AH9	C	984	990	Right-handed alpha
Helix 73	AI1	C	1018	1039	Right-handed alpha
Helix 74	AI2	C	1112	1118	Right-handed alpha
Helix 75	AI3	C	1118	1133	Right-handed alpha
Helix 76	AI4	C	1159	1170	Right-handed alpha
Helix 77	AI5	C	1205	1207	Right-handed 310
Helix 78	AI6	C	1232	1237	Right-handed alpha

There are 25 sheets in PDB entry 6XF7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	272	first strand
Strand 2	B	301	306	anti-parallel
Strand 3	B	1209	1211	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	349	first strand
Strand 2	B	1175	1176	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	380	first strand
Strand 2	B	390	393	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	436	first strand
Strand 2	B	448	453	anti-parallel
Strand 3	B	1254	1258	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	492	494	first strand
Strand 2	B	1272	1274	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	550	551	first strand
Strand 2	B	889	890	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	604	608	first strand
Strand 2	B	873	877	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	717	720	first strand
Strand 2	B	738	741	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	844	850	first strand
Strand 2	B	998	1003	anti-parallel
Strand 3	B	1008	1011	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1074	1076	first strand
Strand 2	B	1107	1110	parallel
Strand 3	B	1136	1151	parallel
Strand 4	B	1040	1051	anti-parallel
Strand 5	B	1195	1201	anti-parallel
Strand 6	B	1157	1158	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1074	1076	first strand
Strand 2	B	1107	1110	parallel
Strand 3	B	1136	1151	parallel
Strand 4	B	1178	1183	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1082	1086	first strand
Strand 2	B	1092	1095	anti-parallel
Strand 3	B	1101	1103	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	234	first strand
Strand 2	C	221	225	anti-parallel
Strand 3	C	1268	1272	parallel
Strand 4	C	492	493	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	259	first strand
Strand 2	C	372	373	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	270	first strand
Strand 2	C	301	306	anti-parallel
Strand 3	C	1209	1212	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	285	first strand
Strand 2	C	288	291	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	378	380	first strand
Strand 2	C	390	392	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	436	first strand
Strand 2	C	447	453	anti-parallel
Strand 3	C	1254	1260	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	441	first strand
Strand 2	C	444	445	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	604	607	first strand
Strand 2	C	873	876	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	717	720	first strand
Strand 2	C	738	741	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	844	850	first strand
Strand 2	C	998	1003	anti-parallel
Strand 3	C	1008	1011	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1040	1042	first strand
Strand 2	C	1143	1151	anti-parallel
Strand 3	C	1178	1183	parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1075	1076	first strand
Strand 2	C	1107	1111	parallel
Strand 3	C	1136	1140	parallel
Strand 4	C	1045	1050	anti-parallel
Strand 5	C	1195	1201	anti-parallel
Strand 6	C	1157	1158	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1095	first strand
Strand 2	C	1101	1102	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XF7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XF7