Analysis of interatomic Contacts of Structural Units in PDB entry:
6XF9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XF9 entry

There are 4 chains in PDB entry 6XF9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2ALA 467
B
 PHE 2ALA 467
C
 PHE 2ALA 467
D
 PHE 2ALA 23
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are125 helices in PDB entry 6XF9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 13Right-handed alpha
Helix 2
AA2
A
13 23Right-handed alpha
Helix 3
AA3
A
29 33Right-handed 310
Helix 4
AA4
A
36 46Right-handed alpha
Helix 5
AA5
A
52 61Right-handed alpha
Helix 6
AA6
A
70 84Right-handed alpha
Helix 7
AA7
A
88 107Right-handed alpha
Helix 8
AA8
A
110 114Right-handed 310
Helix 9
AA9
A
123 132Right-handed alpha
Helix 10
AB1
A
141 143Right-handed 310
Helix 11
AB2
A
144 165Right-handed alpha
Helix 12
AB3
A
206 214Right-handed alpha
Helix 13
AB4
A
224 235Right-handed alpha
Helix 14
AB5
A
277 281Right-handed 310
Helix 15
AB6
A
296 305Right-handed alpha
Helix 16
AB7
A
307 322Right-handed alpha
Helix 17
AB8
A
328 339Right-handed alpha
Helix 18
AB9
A
348 358Right-handed alpha
Helix 19
AC1
A
359 369Right-handed alpha
Helix 20
AC2
A
370 380Right-handed alpha
Helix 21
AC3
A
381 387Right-handed alpha
Helix 22
AC4
A
390 403Right-handed alpha
Helix 23
AC5
A
415 430Right-handed alpha
Helix 24
AC6
A
434 452Right-handed alpha
Helix 25
AC7
A
458 466Right-handed alpha
Helix 26
AC8
B
6 13Right-handed alpha
Helix 27
AC9
B
13 23Right-handed alpha
Helix 28
AD1
B
29 33Right-handed 310
Helix 29
AD2
B
36 46Right-handed alpha
Helix 30
AD3
B
52 61Right-handed alpha
Helix 31
AD4
B
70 84Right-handed alpha
Helix 32
AD5
B
88 107Right-handed alpha
Helix 33
AD6
B
110 114Right-handed 310
Helix 34
AD7
B
123 132Right-handed alpha
Helix 35
AD8
B
141 143Right-handed 310
Helix 36
AD9
B
144 165Right-handed alpha
Helix 37
AE1
B
206 214Right-handed alpha
Helix 38
AE2
B
224 236Right-handed alpha
Helix 39
AE3
B
277 281Right-handed 310
Helix 40
AE4
B
296 305Right-handed alpha
Helix 41
AE5
B
307 322Right-handed alpha
Helix 42
AE6
B
328 339Right-handed alpha
Helix 43
AE7
B
348 358Right-handed alpha
Helix 44
AE8
B
359 369Right-handed alpha
Helix 45
AE9
B
370 380Right-handed alpha
Helix 46
AF1
B
381 387Right-handed alpha
Helix 47
AF2
B
390 403Right-handed alpha
Helix 48
AF3
B
404 408Right-handed 310
Helix 49
AF4
B
415 430Right-handed alpha
Helix 50
AF5
B
434 452Right-handed alpha
Helix 51
AF6
B
458 466Right-handed alpha
Helix 52
AF7
C
6 13Right-handed alpha
Helix 53
AF8
C
13 23Right-handed alpha
Helix 54
AF9
C
29 33Right-handed 310
Helix 55
AG1
C
36 46Right-handed alpha
Helix 56
AG2
C
52 61Right-handed alpha
Helix 57
AG3
C
69 84Right-handed alpha
Helix 58
AG4
C
88 107Right-handed alpha
Helix 59
AG5
C
110 114Right-handed 310
Helix 60
AG6
C
123 132Right-handed alpha
Helix 61
AG7
C
141 143Right-handed 310
Helix 62
AG8
C
144 165Right-handed alpha
Helix 63
AG9
C
206 214Right-handed alpha
Helix 64
AH1
C
224 236Right-handed alpha
Helix 65
AH2
C
277 281Right-handed 310
Helix 66
AH3
C
296 305Right-handed alpha
Helix 67
AH4
C
307 322Right-handed alpha
Helix 68
AH5
C
328 339Right-handed alpha
Helix 69
AH6
C
348 358Right-handed alpha
Helix 70
AH7
C
359 369Right-handed alpha
Helix 71
AH8
C
370 380Right-handed alpha
Helix 72
AH9
C
381 387Right-handed alpha
Helix 73
AI1
C
390 403Right-handed alpha
Helix 74
AI2
C
415 430Right-handed alpha
Helix 75
AI3
C
434 452Right-handed alpha
Helix 76
AI4
C
458 466Right-handed alpha
Helix 77
AI5
D
6 13Right-handed alpha
Helix 78
AI6
D
13 23Right-handed alpha
Helix 79
AI7
D
29 33Right-handed 310
Helix 80
AI8
D
36 46Right-handed alpha
Helix 81
AI9
D
52 61Right-handed alpha
Helix 82
AJ1
D
70 84Right-handed alpha
Helix 83
AJ2
D
88 107Right-handed alpha
Helix 84
AJ3
D
123 132Right-handed alpha
Helix 85
AJ4
D
141 143Right-handed 310
Helix 86
AJ5
D
144 165Right-handed alpha
Helix 87
AJ6
D
206 214Right-handed alpha
Helix 88
AJ7
D
224 236Right-handed alpha
Helix 89
AJ8
D
277 281Right-handed 310
Helix 90
AJ9
D
296 305Right-handed alpha
Helix 91
AK1
D
307 322Right-handed alpha
Helix 92
AK2
D
328 339Right-handed alpha
Helix 93
AK3
D
348 358Right-handed alpha
Helix 94
AK4
D
359 369Right-handed alpha
Helix 95
AK5
D
370 380Right-handed alpha
Helix 96
AK6
D
381 387Right-handed alpha
Helix 97
AK7
D
390 403Right-handed alpha
Helix 98
AK8
D
415 431Right-handed alpha
Helix 99
AK9
D
434 452Right-handed alpha
Helix 100
AL1
D
458 466Right-handed alpha
Helix 101
AL2
E
6 13Right-handed alpha
Helix 102
AL3
E
13 23Right-handed alpha
Helix 103
AL4
E
29 33Right-handed 310
Helix 104
AL5
E
36 46Right-handed alpha
Helix 105
AL6
E
52 61Right-handed alpha
Helix 106
AL7
E
69 84Right-handed alpha
Helix 107
AL8
E
88 107Right-handed alpha
Helix 108
AL9
E
110 114Right-handed 310
Helix 109
AM1
E
123 132Right-handed alpha
Helix 110
AM2
E
141 143Right-handed 310
Helix 111
AM3
E
144 165Right-handed alpha
Helix 112
AM4
E
206 214Right-handed alpha
Helix 113
AM5
E
224 236Right-handed alpha
Helix 114
AM6
E
277 281Right-handed 310
Helix 115
AM7
E
296 305Right-handed alpha
Helix 116
AM8
E
307 322Right-handed alpha
Helix 117
AM9
E
328 339Right-handed alpha
Helix 118
AN1
E
348 358Right-handed alpha
Helix 119
AN2
E
359 369Right-handed alpha
Helix 120
AN3
E
370 380Right-handed alpha
Helix 121
AN4
E
381 387Right-handed alpha
Helix 122
AN5
E
390 403Right-handed alpha
Helix 123
AN6
E
415 431Right-handed alpha
Helix 124
AN7
E
434 452Right-handed alpha
Helix 125
AN8
E
458 466Right-handed alpha
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There are 6 sheets in PDB entry 6XF9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 289first strand
Strand 2
A
292 293anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 289first strand
Strand 2
B
292 293anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
288 289first strand
Strand 2
C
292 293anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 27first strand
Strand 2
D
271 272anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
288 289first strand
Strand 2
D
292 293anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
288 289first strand
Strand 2
E
292 293anti-parallel
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