Analysis of interatomic Contacts of Structural Units in PDB entry:
6XFA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XFA entry

There are 10 chains in PDB entry 6XFA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	VAL 484
B	ASP 3	VAL 484
C	ASP 3	VAL 484
D	ASP 3	VAL 484
E	ASP 3	VAL 484
F	ASP 3	VAL 484
G	ASP 3	VAL 484
H	ASP 3	VAL 484
I	ASP 3	VAL 484
J	ASP 3	VAL 484

There are230 helices in PDB entry 6XFA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	14	Right-handed alpha
Helix 2	AA2	A	15	25	Right-handed alpha
Helix 3	AA3	A	38	48	Right-handed alpha
Helix 4	AA4	A	54	65	Right-handed alpha
Helix 5	AA5	A	72	85	Right-handed alpha
Helix 6	AA6	A	90	109	Right-handed alpha
Helix 7	AA7	A	114	118	Right-handed 310
Helix 8	AA8	A	125	134	Right-handed alpha
Helix 9	AA9	A	147	167	Right-handed alpha
Helix 10	AB1	A	245	252	Right-handed alpha
Helix 11	AB2	A	297	301	Right-handed 310
Helix 12	AB3	A	316	325	Right-handed alpha
Helix 13	AB4	A	327	342	Right-handed alpha
Helix 14	AB5	A	348	359	Right-handed alpha
Helix 15	AB6	A	368	376	Right-handed alpha
Helix 16	AB7	A	379	389	Right-handed alpha
Helix 17	AB8	A	390	400	Right-handed alpha
Helix 18	AB9	A	401	406	Right-handed alpha
Helix 19	AC1	A	410	412	Right-handed 310
Helix 20	AC2	A	413	423	Right-handed alpha
Helix 21	AC3	A	433	448	Right-handed alpha
Helix 22	AC4	A	454	470	Right-handed alpha
Helix 23	AC5	A	475	482	Right-handed alpha
Helix 24	AC6	B	8	14	Right-handed alpha
Helix 25	AC7	B	15	25	Right-handed alpha
Helix 26	AC8	B	38	48	Right-handed alpha
Helix 27	AC9	B	54	65	Right-handed alpha
Helix 28	AD1	B	72	85	Right-handed alpha
Helix 29	AD2	B	90	109	Right-handed alpha
Helix 30	AD3	B	114	118	Right-handed 310
Helix 31	AD4	B	125	134	Right-handed alpha
Helix 32	AD5	B	147	167	Right-handed alpha
Helix 33	AD6	B	245	252	Right-handed alpha
Helix 34	AD7	B	297	301	Right-handed 310
Helix 35	AD8	B	316	325	Right-handed alpha
Helix 36	AD9	B	327	342	Right-handed alpha
Helix 37	AE1	B	348	359	Right-handed alpha
Helix 38	AE2	B	368	376	Right-handed alpha
Helix 39	AE3	B	379	389	Right-handed alpha
Helix 40	AE4	B	390	400	Right-handed alpha
Helix 41	AE5	B	401	406	Right-handed alpha
Helix 42	AE6	B	410	412	Right-handed 310
Helix 43	AE7	B	413	423	Right-handed alpha
Helix 44	AE8	B	433	448	Right-handed alpha
Helix 45	AE9	B	454	470	Right-handed alpha
Helix 46	AF1	B	475	482	Right-handed alpha
Helix 47	AF2	C	8	14	Right-handed alpha
Helix 48	AF3	C	15	25	Right-handed alpha
Helix 49	AF4	C	38	48	Right-handed alpha
Helix 50	AF5	C	54	65	Right-handed alpha
Helix 51	AF6	C	72	85	Right-handed alpha
Helix 52	AF7	C	90	109	Right-handed alpha
Helix 53	AF8	C	114	118	Right-handed 310
Helix 54	AF9	C	125	134	Right-handed alpha
Helix 55	AG1	C	147	167	Right-handed alpha
Helix 56	AG2	C	245	252	Right-handed alpha
Helix 57	AG3	C	297	301	Right-handed 310
Helix 58	AG4	C	316	325	Right-handed alpha
Helix 59	AG5	C	327	342	Right-handed alpha
Helix 60	AG6	C	348	359	Right-handed alpha
Helix 61	AG7	C	368	376	Right-handed alpha
Helix 62	AG8	C	379	389	Right-handed alpha
Helix 63	AG9	C	390	400	Right-handed alpha
Helix 64	AH1	C	401	406	Right-handed alpha
Helix 65	AH2	C	410	412	Right-handed 310
Helix 66	AH3	C	413	423	Right-handed alpha
Helix 67	AH4	C	433	448	Right-handed alpha
Helix 68	AH5	C	454	470	Right-handed alpha
Helix 69	AH6	C	475	482	Right-handed alpha
Helix 70	AH7	D	8	14	Right-handed alpha
Helix 71	AH8	D	15	25	Right-handed alpha
Helix 72	AH9	D	38	48	Right-handed alpha
Helix 73	AI1	D	54	65	Right-handed alpha
Helix 74	AI2	D	72	85	Right-handed alpha
Helix 75	AI3	D	90	109	Right-handed alpha
Helix 76	AI4	D	114	118	Right-handed 310
Helix 77	AI5	D	125	134	Right-handed alpha
Helix 78	AI6	D	147	167	Right-handed alpha
Helix 79	AI7	D	245	252	Right-handed alpha
Helix 80	AI8	D	297	301	Right-handed 310
Helix 81	AI9	D	316	325	Right-handed alpha
Helix 82	AJ1	D	327	342	Right-handed alpha
Helix 83	AJ2	D	348	359	Right-handed alpha
Helix 84	AJ3	D	368	376	Right-handed alpha
Helix 85	AJ4	D	379	389	Right-handed alpha
Helix 86	AJ5	D	390	400	Right-handed alpha
Helix 87	AJ6	D	401	406	Right-handed alpha
Helix 88	AJ7	D	410	412	Right-handed 310
Helix 89	AJ8	D	413	423	Right-handed alpha
Helix 90	AJ9	D	433	448	Right-handed alpha
Helix 91	AK1	D	454	470	Right-handed alpha
Helix 92	AK2	D	475	482	Right-handed alpha
Helix 93	AK3	E	8	14	Right-handed alpha
Helix 94	AK4	E	15	25	Right-handed alpha
Helix 95	AK5	E	38	48	Right-handed alpha
Helix 96	AK6	E	54	65	Right-handed alpha
Helix 97	AK7	E	72	85	Right-handed alpha
Helix 98	AK8	E	90	109	Right-handed alpha
Helix 99	AK9	E	114	118	Right-handed 310
Helix 100	AL1	E	125	134	Right-handed alpha
Helix 101	AL2	E	147	167	Right-handed alpha
Helix 102	AL3	E	245	252	Right-handed alpha
Helix 103	AL4	E	297	301	Right-handed 310
Helix 104	AL5	E	316	325	Right-handed alpha
Helix 105	AL6	E	327	342	Right-handed alpha
Helix 106	AL7	E	348	359	Right-handed alpha
Helix 107	AL8	E	368	376	Right-handed alpha
Helix 108	AL9	E	379	389	Right-handed alpha
Helix 109	AM1	E	390	400	Right-handed alpha
Helix 110	AM2	E	401	406	Right-handed alpha
Helix 111	AM3	E	410	412	Right-handed 310
Helix 112	AM4	E	413	423	Right-handed alpha
Helix 113	AM5	E	433	448	Right-handed alpha
Helix 114	AM6	E	454	470	Right-handed alpha
Helix 115	AM7	E	475	482	Right-handed alpha
Helix 116	AM8	F	8	14	Right-handed alpha
Helix 117	AM9	F	15	25	Right-handed alpha
Helix 118	AN1	F	38	48	Right-handed alpha
Helix 119	AN2	F	54	65	Right-handed alpha
Helix 120	AN3	F	72	85	Right-handed alpha
Helix 121	AN4	F	90	109	Right-handed alpha
Helix 122	AN5	F	114	118	Right-handed 310
Helix 123	AN6	F	125	134	Right-handed alpha
Helix 124	AN7	F	147	167	Right-handed alpha
Helix 125	AN8	F	245	252	Right-handed alpha
Helix 126	AN9	F	297	301	Right-handed 310
Helix 127	AO1	F	316	325	Right-handed alpha
Helix 128	AO2	F	327	342	Right-handed alpha
Helix 129	AO3	F	348	359	Right-handed alpha
Helix 130	AO4	F	368	376	Right-handed alpha
Helix 131	AO5	F	379	389	Right-handed alpha
Helix 132	AO6	F	390	400	Right-handed alpha
Helix 133	AO7	F	401	406	Right-handed alpha
Helix 134	AO8	F	410	412	Right-handed 310
Helix 135	AO9	F	413	423	Right-handed alpha
Helix 136	AP1	F	433	448	Right-handed alpha
Helix 137	AP2	F	454	470	Right-handed alpha
Helix 138	AP3	F	475	482	Right-handed alpha
Helix 139	AP4	G	8	14	Right-handed alpha
Helix 140	AP5	G	15	25	Right-handed alpha
Helix 141	AP6	G	38	48	Right-handed alpha
Helix 142	AP7	G	54	65	Right-handed alpha
Helix 143	AP8	G	72	85	Right-handed alpha
Helix 144	AP9	G	90	109	Right-handed alpha
Helix 145	AQ1	G	114	118	Right-handed 310
Helix 146	AQ2	G	125	134	Right-handed alpha
Helix 147	AQ3	G	147	167	Right-handed alpha
Helix 148	AQ4	G	245	252	Right-handed alpha
Helix 149	AQ5	G	297	301	Right-handed 310
Helix 150	AQ6	G	316	325	Right-handed alpha
Helix 151	AQ7	G	327	342	Right-handed alpha
Helix 152	AQ8	G	348	359	Right-handed alpha
Helix 153	AQ9	G	368	376	Right-handed alpha
Helix 154	AR1	G	379	389	Right-handed alpha
Helix 155	AR2	G	390	400	Right-handed alpha
Helix 156	AR3	G	401	406	Right-handed alpha
Helix 157	AR4	G	410	412	Right-handed 310
Helix 158	AR5	G	413	423	Right-handed alpha
Helix 159	AR6	G	433	448	Right-handed alpha
Helix 160	AR7	G	454	470	Right-handed alpha
Helix 161	AR8	G	475	482	Right-handed alpha
Helix 162	AR9	H	8	14	Right-handed alpha
Helix 163	AS1	H	15	25	Right-handed alpha
Helix 164	AS2	H	38	48	Right-handed alpha
Helix 165	AS3	H	54	65	Right-handed alpha
Helix 166	AS4	H	72	85	Right-handed alpha
Helix 167	AS5	H	90	109	Right-handed alpha
Helix 168	AS6	H	114	118	Right-handed 310
Helix 169	AS7	H	125	134	Right-handed alpha
Helix 170	AS8	H	147	167	Right-handed alpha
Helix 171	AS9	H	245	252	Right-handed alpha
Helix 172	AT1	H	297	301	Right-handed 310
Helix 173	AT2	H	316	325	Right-handed alpha
Helix 174	AT3	H	327	342	Right-handed alpha
Helix 175	AT4	H	348	359	Right-handed alpha
Helix 176	AT5	H	368	376	Right-handed alpha
Helix 177	AT6	H	379	389	Right-handed alpha
Helix 178	AT7	H	390	400	Right-handed alpha
Helix 179	AT8	H	401	406	Right-handed alpha
Helix 180	AT9	H	410	412	Right-handed 310
Helix 181	AU1	H	413	423	Right-handed alpha
Helix 182	AU2	H	433	448	Right-handed alpha
Helix 183	AU3	H	454	470	Right-handed alpha
Helix 184	AU4	H	475	482	Right-handed alpha
Helix 185	AU5	I	8	14	Right-handed alpha
Helix 186	AU6	I	15	25	Right-handed alpha
Helix 187	AU7	I	38	48	Right-handed alpha
Helix 188	AU8	I	54	65	Right-handed alpha
Helix 189	AU9	I	72	85	Right-handed alpha
Helix 190	AV1	I	90	109	Right-handed alpha
Helix 191	AV2	I	114	118	Right-handed 310
Helix 192	AV3	I	125	134	Right-handed alpha
Helix 193	AV4	I	147	167	Right-handed alpha
Helix 194	AV5	I	245	252	Right-handed alpha
Helix 195	AV6	I	297	301	Right-handed 310
Helix 196	AV7	I	316	325	Right-handed alpha
Helix 197	AV8	I	327	342	Right-handed alpha
Helix 198	AV9	I	348	359	Right-handed alpha
Helix 199	AW1	I	368	376	Right-handed alpha
Helix 200	AW2	I	379	389	Right-handed alpha
Helix 201	AW3	I	390	400	Right-handed alpha
Helix 202	AW4	I	401	406	Right-handed alpha
Helix 203	AW5	I	410	412	Right-handed 310
Helix 204	AW6	I	413	423	Right-handed alpha
Helix 205	AW7	I	433	448	Right-handed alpha
Helix 206	AW8	I	454	470	Right-handed alpha
Helix 207	AW9	I	475	482	Right-handed alpha
Helix 208	AX1	J	8	14	Right-handed alpha
Helix 209	AX2	J	15	25	Right-handed alpha
Helix 210	AX3	J	38	48	Right-handed alpha
Helix 211	AX4	J	54	65	Right-handed alpha
Helix 212	AX5	J	72	85	Right-handed alpha
Helix 213	AX6	J	90	109	Right-handed alpha
Helix 214	AX7	J	114	118	Right-handed 310
Helix 215	AX8	J	125	134	Right-handed alpha
Helix 216	AX9	J	147	167	Right-handed alpha
Helix 217	AY1	J	245	252	Right-handed alpha
Helix 218	AY2	J	297	301	Right-handed 310
Helix 219	AY3	J	316	325	Right-handed alpha
Helix 220	AY4	J	327	342	Right-handed alpha
Helix 221	AY5	J	348	359	Right-handed alpha
Helix 222	AY6	J	368	376	Right-handed alpha
Helix 223	AY7	J	379	389	Right-handed alpha
Helix 224	AY8	J	390	400	Right-handed alpha
Helix 225	AY9	J	401	406	Right-handed alpha
Helix 226	AZ1	J	410	412	Right-handed 310
Helix 227	AZ2	J	413	423	Right-handed alpha
Helix 228	AZ3	J	433	448	Right-handed alpha
Helix 229	AZ4	J	454	470	Right-handed alpha
Helix 230	AZ5	J	475	482	Right-handed alpha

There are 10 sheets in PDB entry 6XFA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	309	first strand
Strand 2	A	312	313	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	309	first strand
Strand 2	B	312	313	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	309	first strand
Strand 2	C	312	313	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	308	309	first strand
Strand 2	D	312	313	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	308	309	first strand
Strand 2	E	312	313	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	308	309	first strand
Strand 2	F	312	313	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	308	309	first strand
Strand 2	G	312	313	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	308	309	first strand
Strand 2	H	312	313	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	308	309	first strand
Strand 2	I	312	313	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	308	309	first strand
Strand 2	J	312	313	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XFA

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XFA