Analysis of interatomic Contacts of Structural Units in PDB entry:
6XG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XG8 entry

There are 4 chains in PDB entry 6XG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 6ARG 406
B
 LYS 4ARG 406
D
 G 1 C 26
E
 G 1 C 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6XG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 22Right-handed alpha
Helix 2
AA2
A
26 55Right-handed alpha
Helix 3
AA3
A
112 123Right-handed alpha
Helix 4
AA4
A
125 138Right-handed alpha
Helix 5
AA5
A
142 151Right-handed alpha
Helix 6
AA6
A
153 162Right-handed alpha
Helix 7
AA7
A
217 230Right-handed alpha
Helix 8
AA8
A
245 254Right-handed alpha
Helix 9
AA9
A
262 271Right-handed alpha
Helix 10
AB1
A
286 291Right-handed alpha
Helix 11
AB2
A
294 310Right-handed alpha
Helix 12
AB3
A
315 323Right-handed alpha
Helix 13
AB4
A
323 328Right-handed alpha
Helix 14
AB5
A
329 333Right-handed 310
Helix 15
AB6
A
334 343Right-handed alpha
Helix 16
AB7
A
344 358Right-handed alpha
Helix 17
AB8
A
366 383Right-handed alpha
Helix 18
AB9
A
393 403Right-handed alpha
Helix 19
AC1
B
8 23Right-handed alpha
Helix 20
AC2
B
26 52Right-handed alpha
Helix 21
AC3
B
110 122Right-handed alpha
Helix 22
AC4
B
125 137Right-handed alpha
Helix 23
AC5
B
142 151Right-handed alpha
Helix 24
AC6
B
153 162Right-handed alpha
Helix 25
AC7
B
216 231Right-handed alpha
Helix 26
AC8
B
245 254Right-handed alpha
Helix 27
AC9
B
264 271Right-handed alpha
Helix 28
AD1
B
272 274Right-handed 310
Helix 29
AD2
B
279 291Right-handed alpha
Helix 30
AD3
B
294 310Right-handed alpha
Helix 31
AD4
B
317 323Right-handed alpha
Helix 32
AD5
B
323 328Right-handed alpha
Helix 33
AD6
B
329 333Right-handed 310
Helix 34
AD7
B
334 343Right-handed alpha
Helix 35
AD8
B
346 357Right-handed alpha
Helix 36
AD9
B
366 386Right-handed alpha
Helix 37
AE1
B
391 403Right-handed alpha
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There are 3 sheets in PDB entry 6XG8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 79first strand
Strand 2
A
84 92anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 211first strand
Strand 2
A
186 198anti-parallel
Strand 3
A
168 183anti-parallel
Strand 4
A
234 240parallel
Strand 5
A
258 261parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 212first strand
Strand 2
B
186 198anti-parallel
Strand 3
B
168 183anti-parallel
Strand 4
B
234 240parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il