Analysis of interatomic Contacts of Structural Units in PDB entry:
6XGY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XGY entry

There are 2 chains in PDB entry 6XGY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5GLY 268
B
 TYR -1ARG 97
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6XGY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 56Right-handed alpha
Helix 2
AA2
A
76 84Right-handed alpha
Helix 3
AA3
A
101 114Right-handed alpha
Helix 4
AA4
A
117 132Right-handed alpha
Helix 5
AA5
A
134 138Right-handed 310
Helix 6
AA6
A
146 159Right-handed alpha
Helix 7
AA7
A
176 195Right-handed alpha
Helix 8
AA8
A
204 210Right-handed alpha
Helix 9
AA9
A
228 234Right-handed alpha
Helix 10
AB1
A
237 246Right-handed alpha
Helix 11
AB2
A
260 266Right-handed alpha
Helix 12
AB3
B
25 31Right-handed alpha
Helix 13
AB4
B
31 36Right-handed alpha
Helix 14
AB5
B
51 69Right-handed alpha
Helix 15
AB6
B
78 88Right-handed alpha
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There are 4 sheets in PDB entry 6XGY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 27first strand
Strand 2
A
7 18anti-parallel
Strand 3
A
30 32anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 27first strand
Strand 2
A
7 18anti-parallel
Strand 3
A
62 67anti-parallel
Strand 4
A
70 71anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 90first strand
Strand 2
A
165 169parallel
Strand 3
A
197 201parallel
Strand 4
A
36 40parallel
Strand 5
A
214 219parallel
Strand 6
A
222 227anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 10first strand
Strand 2
B
13 20anti-parallel
Strand 3
B
41 50parallel
Strand 4
B
73 75parallel
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