Analysis of interatomic Contacts of Structural Units in PDB entry:
6XH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XH9 entry

There are 2 chains in PDB entry 6XH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 37
A
 ALA 39MET 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6XH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 47Right-handed alpha
Helix 2
AA2
A
124 126Right-handed 310
Helix 3
AA3
A
136 141Right-handed alpha
Helix 4
AA4
A
142 156Right-handed alpha
Helix 5
AA5
A
157 161Right-handed 310
Helix 6
AA6
A
173 187Right-handed alpha
Helix 7
AA7
A
198 203Right-handed alpha
Helix 8
AA8
A
233 246Right-handed alpha
Helix 9
AA9
A
265 273Right-handed alpha
Helix 10
AB1
A
283 297Right-handed alpha
Helix 11
AB2
A
298 306Right-handed alpha
Helix 12
AB3
A
316 330Right-handed alpha
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There are 4 sheets in PDB entry 6XH9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 10first strand
Strand 2
A
13 20anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
28 36anti-parallel
Strand 3
A
65 72anti-parallel
Strand 4
A
83 86anti-parallel
Strand 5
A
128 130anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
28 36anti-parallel
Strand 3
A
334 339anti-parallel
Strand 4
A
308 314parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 213first strand
Strand 2
A
191 196parallel
Strand 3
A
166 170parallel
Strand 4
A
225 228parallel
Strand 5
A
251 254parallel
Strand 6
A
275 278parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il