Analysis of interatomic Contacts of Structural Units in PDB entry:
6XHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XHB entry

There are 3 chains in PDB entry 6XHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 168
B
 SER 55GLU 94
B
 CYS 96SER 188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6XHB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 25Right-handed alpha
Helix 2
AA2
A
67 75Right-handed alpha
Helix 3
AA3
A
86 105Right-handed alpha
Helix 4
AA4
A
126 138Right-handed alpha
Helix 5
AA5
A
151 167Right-handed alpha
Helix 6
AA6
B
77 89Right-handed alpha
Helix 7
AA7
B
92 94Right-handed 310
Helix 8
AA8
B
117 122Right-handed 310
Helix 9
AA9
B
173 180Right-handed 310
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There are 3 sheets in PDB entry 6XHB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
111 116parallel
Strand 3
A
77 83parallel
Strand 4
A
2 10parallel
Strand 5
A
49 57parallel
Strand 6
A
38 46anti-parallel
Strand 7
B
66 71anti-parallel
Strand 8
B
57 62anti-parallel
Strand 9
B
126 130parallel
Strand 10
B
96 101anti-parallel
Strand 11
B
109 112anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 137first strand
Strand 2
B
184 185anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 145first strand
Strand 2
B
161 165anti-parallel
Strand 3
B
171 172anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il