Analysis of interatomic Contacts of Structural Units in PDB entry:
6XHI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XHI entry

There is 1 chain in PDB entry 6XHI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 21ALA 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6XHI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 47Right-handed alpha
Helix 2
AA2
A
70 76Right-handed alpha
Helix 3
AA3
A
82 100Right-handed alpha
Helix 4
AA4
A
102 122Right-handed alpha
Helix 5
AA5
A
126 149Right-handed alpha
Helix 6
AA6
A
156 169Right-handed alpha
Helix 7
AA7
A
171 176Right-handed 310
Helix 8
AA8
A
177 192Right-handed alpha
Helix 9
AA9
A
202 204Right-handed 310
Helix 10
AB1
A
215 219Right-handed 310
Helix 11
AB2
A
271 290Right-handed alpha
Helix 12
AB3
A
306 313Right-handed alpha
Helix 13
AB4
A
325 335Right-handed alpha
Helix 14
AB5
A
386 411Right-handed alpha
Helix 15
AB6
A
418 436Right-handed alpha
Helix 16
AB7
A
438 452Right-handed alpha
Helix 17
AB8
A
453 461Right-handed alpha
Helix 18
AB9
A
464 478Right-handed alpha
Helix 19
AC1
A
504 524Right-handed alpha
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There are 7 sheets in PDB entry 6XHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
528 530anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
65 68anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
412 415anti-parallel
Strand 3
A
502 503anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
198 200anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 211first strand
Strand 2
A
378 383parallel
Strand 3
A
220 221anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 227first strand
Strand 2
A
364 370anti-parallel
Strand 3
A
351 361anti-parallel
Strand 4
A
239 248anti-parallel
Strand 5
A
296 299parallel
Strand 6
A
317 319parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 487first strand
Strand 2
A
492 495anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il