Analysis of interatomic Contacts of Structural Units in PDB entry:
6XHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XHJ entry

There is 1 chain in PDB entry 6XHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 21ALA 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6XHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 46Right-handed alpha
Helix 2
AA2
A
47 49Right-handed 310
Helix 3
AA3
A
70 75Right-handed alpha
Helix 4
AA4
A
82 100Right-handed alpha
Helix 5
AA5
A
104 122Right-handed alpha
Helix 6
AA6
A
126 149Right-handed alpha
Helix 7
AA7
A
156 169Right-handed alpha
Helix 8
AA8
A
174 177Right-handed 310
Helix 9
AA9
A
178 191Right-handed alpha
Helix 10
AB1
A
202 204Right-handed 310
Helix 11
AB2
A
269 291Right-handed alpha
Helix 12
AB3
A
307 313Right-handed alpha
Helix 13
AB4
A
326 335Right-handed alpha
Helix 14
AB5
A
386 409Right-handed alpha
Helix 15
AB6
A
418 436Right-handed alpha
Helix 16
AB7
A
438 459Right-handed alpha
Helix 17
AB8
A
460 462Right-handed 310
Helix 18
AB9
A
466 478Right-handed alpha
Helix 19
AC1
A
505 520Right-handed alpha
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There are 7 sheets in PDB entry 6XHJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
527 529anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
65 68anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
412 415anti-parallel
Strand 3
A
502 504anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
198 200anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 212first strand
Strand 2
A
378 384parallel
Strand 3
A
220 221anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 227first strand
Strand 2
A
366 372anti-parallel
Strand 3
A
351 359anti-parallel
Strand 4
A
239 248anti-parallel
Strand 5
A
296 299parallel
Strand 6
A
318 319parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 486first strand
Strand 2
A
493 495anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il