Analysis of interatomic Contacts of Structural Units in PDB entry:
6XHT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XHT entry

There are 6 chains in PDB entry 6XHT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 233
B	MET 1	ALA 236
C	MET 1	ALA 236
D	MET 1	ALA 236
E	MET 1	ALA 236
F	MET 1	ILE 122

There are 66 helices in PDB entry 6XHT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	24	Right-handed 310
Helix 2	AA2	A	32	42	Right-handed alpha
Helix 3	AA3	A	54	56	Right-handed 310
Helix 4	AA4	A	57	68	Right-handed alpha
Helix 5	AA5	A	83	99	Right-handed alpha
Helix 6	AA6	A	118	133	Right-handed alpha
Helix 7	AA7	A	159	161	Right-handed 310
Helix 8	AA8	A	174	184	Right-handed alpha
Helix 9	AA9	A	185	192	Right-handed alpha
Helix 10	AB1	A	194	202	Right-handed alpha
Helix 11	AB2	A	220	233	Right-handed alpha
Helix 12	AB3	B	21	25	Right-handed 310
Helix 13	AB4	B	31	42	Right-handed alpha
Helix 14	AB5	B	54	56	Right-handed 310
Helix 15	AB6	B	57	68	Right-handed alpha
Helix 16	AB7	B	83	99	Right-handed alpha
Helix 17	AB8	B	118	133	Right-handed alpha
Helix 18	AB9	B	159	161	Right-handed 310
Helix 19	AC1	B	174	183	Right-handed alpha
Helix 20	AC2	B	185	192	Right-handed alpha
Helix 21	AC3	B	195	202	Right-handed alpha
Helix 22	AC4	B	220	234	Right-handed alpha
Helix 23	AC5	C	21	24	Right-handed 310
Helix 24	AC6	C	32	42	Right-handed alpha
Helix 25	AC7	C	54	56	Right-handed 310
Helix 26	AC8	C	57	68	Right-handed alpha
Helix 27	AC9	C	83	99	Right-handed alpha
Helix 28	AD1	C	118	133	Right-handed alpha
Helix 29	AD2	C	159	161	Right-handed 310
Helix 30	AD3	C	174	184	Right-handed alpha
Helix 31	AD4	C	185	192	Right-handed alpha
Helix 32	AD5	C	194	202	Right-handed alpha
Helix 33	AD6	C	220	234	Right-handed alpha
Helix 34	AD7	D	21	24	Right-handed 310
Helix 35	AD8	D	32	42	Right-handed alpha
Helix 36	AD9	D	54	56	Right-handed 310
Helix 37	AE1	D	57	68	Right-handed alpha
Helix 38	AE2	D	83	99	Right-handed alpha
Helix 39	AE3	D	118	133	Right-handed alpha
Helix 40	AE4	D	159	161	Right-handed 310
Helix 41	AE5	D	174	184	Right-handed alpha
Helix 42	AE6	D	185	192	Right-handed alpha
Helix 43	AE7	D	194	202	Right-handed alpha
Helix 44	AE8	D	220	234	Right-handed alpha
Helix 45	AE9	E	21	25	Right-handed 310
Helix 46	AF1	E	31	42	Right-handed alpha
Helix 47	AF2	E	54	56	Right-handed 310
Helix 48	AF3	E	57	68	Right-handed alpha
Helix 49	AF4	E	83	99	Right-handed alpha
Helix 50	AF5	E	118	133	Right-handed alpha
Helix 51	AF6	E	159	161	Right-handed 310
Helix 52	AF7	E	174	184	Right-handed alpha
Helix 53	AF8	E	185	191	Right-handed alpha
Helix 54	AF9	E	195	202	Right-handed alpha
Helix 55	AG1	E	220	234	Right-handed alpha
Helix 56	AG2	F	21	24	Right-handed 310
Helix 57	AG3	F	32	42	Right-handed alpha
Helix 58	AG4	F	54	56	Right-handed 310
Helix 59	AG5	F	57	68	Right-handed alpha
Helix 60	AG6	F	83	99	Right-handed alpha
Helix 61	AG7	F	118	133	Right-handed alpha
Helix 62	AG8	F	159	161	Right-handed 310
Helix 63	AG9	F	174	184	Right-handed alpha
Helix 64	AH1	F	185	192	Right-handed alpha
Helix 65	AH2	F	194	202	Right-handed alpha
Helix 66	AH3	F	220	234	Right-handed alpha

There are 20 sheets in PDB entry 6XHT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	79	first strand
Strand 2	A	46	53	parallel
Strand 3	A	2	7	parallel
Strand 4	A	106	111	parallel
Strand 5	A	163	173	anti-parallel
Strand 6	A	134	140	anti-parallel
Strand 7	A	207	210	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	79	first strand
Strand 2	A	46	53	parallel
Strand 3	A	2	7	parallel
Strand 4	A	106	111	parallel
Strand 5	A	163	173	anti-parallel
Strand 6	B	145	147	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	19	20	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	27	first strand
Strand 2	A	30	31	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	147	first strand
Strand 2	B	163	173	anti-parallel
Strand 3	B	106	111	anti-parallel
Strand 4	B	2	7	parallel
Strand 5	B	46	53	parallel
Strand 6	B	75	79	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	147	first strand
Strand 2	B	163	173	anti-parallel
Strand 3	B	134	140	anti-parallel
Strand 4	B	207	210	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	79	first strand
Strand 2	C	46	53	parallel
Strand 3	C	2	7	parallel
Strand 4	C	106	111	parallel
Strand 5	C	163	173	anti-parallel
Strand 6	C	134	140	anti-parallel
Strand 7	C	207	210	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	79	first strand
Strand 2	C	46	53	parallel
Strand 3	C	2	7	parallel
Strand 4	C	106	111	parallel
Strand 5	C	163	173	anti-parallel
Strand 6	D	145	147	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	19	20	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	27	first strand
Strand 2	C	30	31	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	147	first strand
Strand 2	D	163	173	anti-parallel
Strand 3	D	106	111	anti-parallel
Strand 4	D	2	7	parallel
Strand 5	D	46	53	parallel
Strand 6	D	75	79	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	147	first strand
Strand 2	D	163	173	anti-parallel
Strand 3	D	134	140	anti-parallel
Strand 4	D	207	210	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	19	20	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	27	first strand
Strand 2	D	30	31	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	75	79	first strand
Strand 2	E	46	53	parallel
Strand 3	E	2	7	parallel
Strand 4	E	106	111	parallel
Strand 5	E	163	173	anti-parallel
Strand 6	E	134	140	anti-parallel
Strand 7	E	207	210	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	75	79	first strand
Strand 2	E	46	53	parallel
Strand 3	E	2	7	parallel
Strand 4	E	106	111	parallel
Strand 5	E	163	173	anti-parallel
Strand 6	F	145	147	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	147	first strand
Strand 2	F	163	173	anti-parallel
Strand 3	F	106	111	anti-parallel
Strand 4	F	2	7	parallel
Strand 5	F	46	53	parallel
Strand 6	F	75	79	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	147	first strand
Strand 2	F	163	173	anti-parallel
Strand 3	F	134	140	anti-parallel
Strand 4	F	207	210	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	19	20	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	27	first strand
Strand 2	F	30	31	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XHT

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XHT