Analysis of interatomic Contacts of Structural Units in PDB entry:
6XI8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XI8 entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 6XI8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 PRO 259GLU 320
A
 GLU 6LEU 161
A
 SER 163LYS 303
B
 TYR 49LEU 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6XI8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
284 287Right-handed 310
Helix 2
AA2
C
288 293Right-handed alpha
Helix 3
AA3
C
297 309Right-handed alpha
Helix 4
AA4
A
48 56Right-handed alpha
Helix 5
AA5
A
88 95Right-handed alpha
Helix 6
AA6
A
104 123Right-handed alpha
Helix 7
AA7
A
167 171Right-handed 310
Helix 8
AA8
A
172 178Right-handed alpha
Helix 9
AA9
A
185 201Right-handed alpha
Helix 10
AB1
A
211 221Right-handed alpha
Helix 11
AB2
A
248 252Right-handed 310
Helix 12
AB3
A
262 271Right-handed alpha
Helix 13
AB4
A
280 284Right-handed 310
Helix 14
AB5
B
52 57Right-handed alpha
Helix 15
AB6
B
61 73Right-handed alpha
Helix 16
AB7
B
77 84Right-handed alpha
Helix 17
AB8
B
94 106Right-handed alpha
Helix 18
AB9
B
108 131Right-handed alpha
Helix 19
AC1
B
134 152Right-handed alpha
Helix 20
AC2
B
158 174Right-handed alpha
Helix 21
AC3
B
179 186Right-handed alpha
Helix 22
AC4
B
198 206Right-handed alpha
Helix 23
AC5
B
214 222Right-handed alpha
Helix 24
AC6
B
223 229Right-handed alpha
Helix 25
AC7
B
235 240Right-handed alpha
Helix 26
AC8
B
244 255Right-handed alpha
Helix 27
AC9
B
262 271Right-handed alpha
Helix 28
AD1
B
272 275Right-handed 310
Helix 29
AD2
B
278 287Right-handed alpha
Helix 30
AD3
B
328 345Right-handed alpha
Helix 31
AD4
B
352 360Right-handed alpha
Helix 32
AD5
B
364 370Right-handed alpha
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There are 2 sheets in PDB entry 6XI8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
36 38anti-parallel
Strand 3
A
79 80anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
144 145anti-parallel
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