Analysis of interatomic Contacts of Structural Units in PDB entry:
6XJ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XJ1 entry

There are 2 chains in PDB entry 6XJ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 35ASN 300
B
 PHE 22LYS 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6XJ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 47Right-handed alpha
Helix 2
AA2
A
48 65Right-handed alpha
Helix 3
AA3
A
66 76Right-handed alpha
Helix 4
AA4
A
92 117Right-handed alpha
Helix 5
AA5
A
119 128Right-handed alpha
Helix 6
AA6
A
128 133Right-handed alpha
Helix 7
AA7
A
138 158Right-handed alpha
Helix 8
AA8
A
159 175Right-handed alpha
Helix 9
AA9
A
181 229Right-handed alpha
Helix 10
AB1
A
230 264Right-handed alpha
Helix 11
AB2
A
269 282Right-handed alpha
Helix 12
AB3
A
296 300Right-handed 310
Helix 13
AB4
B
31 75Right-handed alpha
Helix 14
AB5
B
83 112Right-handed alpha
Helix 15
AB6
B
113 133Right-handed alpha
Helix 16
AB7
B
135 174Right-handed alpha
Helix 17
AB8
B
182 200Right-handed alpha
Helix 18
AB9
B
202 267Right-handed alpha
Helix 19
AC1
B
271 275Right-handed 310
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There are no sheets in PDB entry 6XJ1
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il