Analysis of interatomic Contacts of Structural Units in PDB entry:
6XJ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XJ3 entry

There are 4 chains in PDB entry 6XJ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 25PRO 265
B
 GLY 24ASN 266
C
 GLY 24PRO 265
D
 THR 25PRO 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6XJ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 38Right-handed alpha
Helix 2
AA2
A
60 65Right-handed alpha
Helix 3
AA3
A
70 73Right-handed 310
Helix 4
AA4
A
74 85Right-handed alpha
Helix 5
AA5
A
104 108Right-handed 310
Helix 6
AA6
A
112 120Right-handed alpha
Helix 7
AA7
A
121 132Right-handed alpha
Helix 8
AA8
A
133 145Right-handed alpha
Helix 9
AA9
A
167 180Right-handed alpha
Helix 10
AB1
A
186 197Right-handed alpha
Helix 11
AB2
A
241 246Right-handed 310
Helix 12
AB3
A
247 260Right-handed alpha
Helix 13
AB4
B
31 38Right-handed alpha
Helix 14
AB5
B
60 66Right-handed alpha
Helix 15
AB6
B
70 73Right-handed 310
Helix 16
AB7
B
74 85Right-handed alpha
Helix 17
AB8
B
104 108Right-handed 310
Helix 18
AB9
B
112 120Right-handed alpha
Helix 19
AC1
B
121 133Right-handed alpha
Helix 20
AC2
B
133 144Right-handed alpha
Helix 21
AC3
B
167 180Right-handed alpha
Helix 22
AC4
B
186 197Right-handed alpha
Helix 23
AC5
B
241 246Right-handed 310
Helix 24
AC6
B
247 260Right-handed alpha
Helix 25
AC7
C
31 38Right-handed alpha
Helix 26
AC8
C
60 66Right-handed alpha
Helix 27
AC9
C
70 73Right-handed 310
Helix 28
AD1
C
74 85Right-handed alpha
Helix 29
AD2
C
104 108Right-handed 310
Helix 30
AD3
C
112 120Right-handed alpha
Helix 31
AD4
C
121 133Right-handed alpha
Helix 32
AD5
C
133 144Right-handed alpha
Helix 33
AD6
C
167 180Right-handed alpha
Helix 34
AD7
C
186 197Right-handed alpha
Helix 35
AD8
C
241 246Right-handed 310
Helix 36
AD9
C
247 260Right-handed alpha
Helix 37
AE1
D
31 38Right-handed alpha
Helix 38
AE2
D
60 65Right-handed alpha
Helix 39
AE3
D
70 73Right-handed 310
Helix 40
AE4
D
74 85Right-handed alpha
Helix 41
AE5
D
104 108Right-handed 310
Helix 42
AE6
D
112 120Right-handed alpha
Helix 43
AE7
D
121 132Right-handed alpha
Helix 44
AE8
D
133 145Right-handed alpha
Helix 45
AE9
D
167 180Right-handed alpha
Helix 46
AF1
D
186 197Right-handed alpha
Helix 47
AF2
D
241 246Right-handed 310
Helix 48
AF3
D
247 260Right-handed alpha
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There are 4 sheets in PDB entry 6XJ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
57 59parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
229 238anti-parallel
Strand 5
A
217 226anti-parallel
Strand 6
A
205 213anti-parallel
Strand 7
A
198 202anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 27first strand
Strand 2
B
56 59parallel
Strand 3
B
42 48anti-parallel
Strand 4
B
229 238anti-parallel
Strand 5
B
217 226anti-parallel
Strand 6
B
205 213anti-parallel
Strand 7
B
198 202anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 27first strand
Strand 2
C
56 59parallel
Strand 3
C
42 48anti-parallel
Strand 4
C
229 238anti-parallel
Strand 5
C
217 226anti-parallel
Strand 6
C
205 213anti-parallel
Strand 7
C
198 202anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 27first strand
Strand 2
D
57 59parallel
Strand 3
D
42 48anti-parallel
Strand 4
D
229 238anti-parallel
Strand 5
D
217 226anti-parallel
Strand 6
D
205 213anti-parallel
Strand 7
D
198 202anti-parallel
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