Analysis of interatomic Contacts of Structural Units in PDB entry:
6XJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XJB entry

There is 1 chain in PDB entry 6XJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 674ILE 1958
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6XJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
782 793Right-handed alpha
Helix 2
AA2
A
1010 1015Right-handed alpha
Helix 3
AA3
A
1079 1083Right-handed 310
Helix 4
AA4
A
1119 1128Right-handed alpha
Helix 5
AA5
A
1134 1143Right-handed alpha
Helix 6
AA6
A
1169 1174Right-handed alpha
Helix 7
AA7
A
1211 1213Right-handed 310
Helix 8
AA8
A
1224 1238Right-handed alpha
Helix 9
AA9
A
1243 1250Right-handed alpha
Helix 10
AB1
A
1263 1273Right-handed alpha
Helix 11
AB2
A
1273 1286Right-handed alpha
Helix 12
AB3
A
1292 1306Right-handed alpha
Helix 13
AB4
A
1306 1321Right-handed alpha
Helix 14
AB5
A
1330 1335Right-handed alpha
Helix 15
AB6
A
1347 1357Right-handed alpha
Helix 16
AB7
A
1364 1366Right-handed 310
Helix 17
AB8
A
1367 1375Right-handed alpha
Helix 18
AB9
A
1384 1396Right-handed alpha
Helix 19
AC1
A
1401 1410Right-handed alpha
Helix 20
AC2
A
1421 1430Right-handed alpha
Helix 21
AC3
A
1438 1444Right-handed alpha
Helix 22
AC4
A
1450 1452Right-handed 310
Helix 23
AC5
A
1453 1459Right-handed alpha
Helix 24
AC6
A
1480 1482Right-handed 310
Helix 25
AC7
A
1491 1519Right-handed alpha
Helix 26
AC8
A
1523 1527Right-handed 310
Helix 27
AC9
A
1558 1564Right-handed alpha
Helix 28
AD1
A
1595 1610Right-handed alpha
Helix 29
AD2
A
1628 1633Right-handed alpha
Helix 30
AD3
A
1658 1662Right-handed 310
Helix 31
AD4
A
1676 1705Right-handed alpha
Helix 32
AD5
A
1707 1714Right-handed alpha
Helix 33
AD6
A
1742 1749Right-handed alpha
Helix 34
AD7
A
1751 1758Right-handed alpha
Helix 35
AD8
A
1798 1812Right-handed alpha
Helix 36
AD9
A
1817 1823Right-handed alpha
Helix 37
AE1
A
1826 1834Right-handed alpha
Helix 38
AE2
A
1848 1857Right-handed alpha
Helix 39
AE3
A
1863 1880Right-handed alpha
Helix 40
AE4
A
1904 1921Right-handed alpha
Helix 41
AE5
A
1934 1951Right-handed alpha
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There are 17 sheets in PDB entry 6XJB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 681first strand
Strand 2
A
753 757parallel
Strand 3
A
760 762anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
699 700first strand
Strand 2
A
685 692anti-parallel
Strand 3
A
715 720anti-parallel
Strand 4
A
726 737anti-parallel
Strand 5
A
742 748anti-parallel
Strand 6
A
765 769anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
699 700first strand
Strand 2
A
685 692anti-parallel
Strand 3
A
715 720anti-parallel
Strand 4
A
726 737anti-parallel
Strand 5
A
1287 1288parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
797 799first strand
Strand 2
A
827 829parallel
Strand 3
A
853 854parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
804 805first strand
Strand 2
A
837 839parallel
Strand 3
A
858 866parallel
Strand 4
A
887 894parallel
Strand 5
A
919 921parallel
Strand 6
A
953 956parallel
Strand 7
A
986 987parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
804 805first strand
Strand 2
A
837 839parallel
Strand 3
A
858 866parallel
Strand 4
A
887 894parallel
Strand 5
A
914 915parallel
Strand 6
A
949 950parallel
Strand 7
A
982 983parallel
Strand 8
A
1020 1022parallel
Strand 9
A
1045 1046parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
848 849first strand
Strand 2
A
874 877parallel
Strand 3
A
902 905parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
870 871first strand
Strand 2
A
898 899parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
882 884first strand
Strand 2
A
909 911parallel
Strand 3
A
944 946parallel
Strand 4
A
977 979parallel
Strand 5
A
1016 1018parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
930 931first strand
Strand 2
A
964 965parallel
Strand 3
A
995 996parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1053 1055first strand
Strand 2
A
1063 1065anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1159 1161first strand
Strand 2
A
1180 1184anti-parallel
Strand 3
A
1190 1196anti-parallel
Strand 4
A
1207 1209anti-parallel
Strand 5
A
1215 1216anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1324 1325first strand
Strand 2
A
1328 1329anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1413 1417first strand
Strand 2
A
1465 1470parallel
Strand 3
A
1475 1478anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1533 1534first strand
Strand 2
A
1586 1588parallel
Strand 3
A
1579 1581anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1734 1739first strand
Strand 2
A
1715 1722anti-parallel
Strand 3
A
1760 1762anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1836 1839first strand
Strand 2
A
1842 1845anti-parallel
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