Analysis of interatomic Contacts of Structural Units in PDB entry:
6XJJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XJJ entry

There is 1 chain in PDB entry 6XJJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 6LEU 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6XJJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 18Right-handed alpha
Helix 2
AA2
A
22 40Right-handed alpha
Helix 3
AA3
A
51 67Right-handed alpha
Helix 4
AA4
A
69 75Right-handed alpha
Helix 5
AA5
A
76 81Right-handed 310
Helix 6
AA6
A
141 172Right-handed alpha
Helix 7
AA7
A
178 183Right-handed 310
Helix 8
AA8
A
233 236Right-handed 310
Helix 9
AA9
A
253 260Right-handed alpha
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There are 2 sheets in PDB entry 6XJJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
42 46parallel
Strand 3
A
248 252anti-parallel
Strand 4
A
216 220anti-parallel
Strand 5
A
278 285anti-parallel
Strand 6
A
189 194anti-parallel
Strand 7
A
106 111anti-parallel
Strand 8
A
88 90anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 210first strand
Strand 2
A
269 271anti-parallel
Strand 3
A
228 232anti-parallel
Strand 4
A
237 240anti-parallel
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