Analysis of interatomic Contacts of Structural Units in PDB entry:
6XJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XJL entry

There is 1 chain in PDB entry 6XJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE -3GLY 609
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6XJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
39 48Right-handed alpha
Helix 3
AA3
A
49 56Right-handed alpha
Helix 4
AA4
A
84 97Right-handed alpha
Helix 5
AA5
A
112 123Right-handed alpha
Helix 6
AA6
A
166 185Right-handed alpha
Helix 7
AA7
A
196 213Right-handed alpha
Helix 8
AA8
A
214 218Right-handed 310
Helix 9
AA9
A
234 236Right-handed 310
Helix 10
AB1
A
238 242Right-handed 310
Helix 11
AB2
A
246 255Right-handed alpha
Helix 12
AB3
A
271 274Right-handed 310
Helix 13
AB4
A
284 291Right-handed alpha
Helix 14
AB5
A
294 314Right-handed alpha
Helix 15
AB6
A
337 359Right-handed alpha
Helix 16
AB7
A
360 374Right-handed alpha
Helix 17
AB8
A
376 388Right-handed alpha
Helix 18
AB9
A
394 410Right-handed alpha
Helix 19
AC1
A
416 427Right-handed alpha
Helix 20
AC2
A
431 436Right-handed alpha
Helix 21
AC3
A
436 447Right-handed alpha
Helix 22
AC4
A
489 493Right-handed 310
Helix 23
AC5
A
500 511Right-handed alpha
Helix 24
AC6
A
559 573Right-handed alpha
Helix 25
AC7
A
587 603Right-handed alpha
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There are 3 sheets in PDB entry 6XJL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
32 36parallel
Strand 3
A
72 81parallel
Strand 4
A
100 107parallel
Strand 5
A
128 133parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 142first strand
Strand 2
A
145 147anti-parallel
Strand 3
A
576 582parallel
Strand 4
A
548 555parallel
Strand 5
A
227 232parallel
Strand 6
A
189 192parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 263first strand
Strand 2
A
276 278anti-parallel
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