Analysis of interatomic Contacts of Structural Units in PDB entry:
6XKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XKG entry

There are 2 chains in PDB entry 6XKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 141GLY 406
A
 GLU 147GLY 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6XKG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
164 173Right-handed alpha
Helix 2
AA2
B
191 193Right-handed 310
Helix 3
AA3
B
194 203Right-handed alpha
Helix 4
AA4
B
217 222Right-handed 310
Helix 5
AA5
B
224 233Right-handed alpha
Helix 6
AA6
B
244 260Right-handed alpha
Helix 7
AA7
B
265 271Right-handed alpha
Helix 8
AA8
B
283 288Right-handed alpha
Helix 9
AA9
B
290 300Right-handed alpha
Helix 10
AB1
B
303 305Right-handed 310
Helix 11
AB2
B
312 318Right-handed alpha
Helix 12
AB3
B
318 331Right-handed alpha
Helix 13
AB4
B
337 339Right-handed 310
Helix 14
AB5
B
376 399Right-handed alpha
Helix 15
AB6
A
164 173Right-handed alpha
Helix 16
AB7
A
191 194Right-handed 310
Helix 17
AB8
A
195 202Right-handed alpha
Helix 18
AB9
A
218 222Right-handed 310
Helix 19
AC1
A
224 233Right-handed alpha
Helix 20
AC2
A
244 260Right-handed alpha
Helix 21
AC3
A
265 271Right-handed alpha
Helix 22
AC4
A
283 288Right-handed alpha
Helix 23
AC5
A
290 300Right-handed alpha
Helix 24
AC6
A
303 305Right-handed 310
Helix 25
AC7
A
312 318Right-handed alpha
Helix 26
AC8
A
318 331Right-handed alpha
Helix 27
AC9
A
337 339Right-handed 310
Helix 28
AD1
A
376 399Right-handed alpha
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There are 6 sheets in PDB entry 6XKG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
205 206anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 180first strand
Strand 2
B
211 215parallel
Strand 3
B
155 159parallel
Strand 4
B
237 242parallel
Strand 5
B
307 311parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 344first strand
Strand 2
B
349 352anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
205 206anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
211 215parallel
Strand 3
A
155 159parallel
Strand 4
A
237 242parallel
Strand 5
A
307 311parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 344first strand
Strand 2
A
349 352anti-parallel
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