Analysis of interatomic Contacts of Structural Units in PDB entry:
6XLL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XLL entry

There are 9 chains in PDB entry 6XLL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	ARG 235
B	SER 4	LEU 234
C	TYR 3	ASP 1341
D	GLU 16	ALA 1375
E	ALA 2	LEU 80
F	SER 89	ASP 613
N	G 35	G 88
T	C 1	C 54
R	C 2	U 5

There are134 helices in PDB entry 6XLL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	51	Right-handed alpha
Helix 2	AA2	A	77	86	Right-handed alpha
Helix 3	AA3	A	113	115	Right-handed 310
Helix 4	AA4	A	154	158	Right-handed 310
Helix 5	AA5	A	212	228	Right-handed alpha
Helix 6	AA6	A	228	234	Right-handed alpha
Helix 7	AA7	B	34	50	Right-handed alpha
Helix 8	AA8	B	77	87	Right-handed alpha
Helix 9	AA9	B	111	115	Right-handed 310
Helix 10	AB1	B	212	229	Right-handed alpha
Helix 11	AB2	C	28	40	Right-handed alpha
Helix 12	AB3	C	47	57	Right-handed alpha
Helix 13	AB4	C	81	88	Right-handed alpha
Helix 14	AB5	C	206	213	Right-handed alpha
Helix 15	AB6	C	216	225	Right-handed alpha
Helix 16	AB7	C	242	247	Right-handed 310
Helix 17	AB8	C	270	280	Right-handed alpha
Helix 18	AB9	C	288	293	Right-handed 310
Helix 19	AC1	C	318	326	Right-handed alpha
Helix 20	AC2	C	327	329	Right-handed 310
Helix 21	AC3	C	345	352	Right-handed alpha
Helix 22	AC4	C	358	371	Right-handed alpha
Helix 23	AC5	C	377	390	Right-handed alpha
Helix 24	AC6	C	398	409	Right-handed alpha
Helix 25	AC7	C	421	437	Right-handed alpha
Helix 26	AC8	C	455	479	Right-handed alpha
Helix 27	AC9	C	488	492	Right-handed 310
Helix 28	AD1	C	494	509	Right-handed alpha
Helix 29	AD2	C	519	527	Right-handed alpha
Helix 30	AD3	C	551	555	Right-handed 310
Helix 31	AD4	C	664	668	Right-handed 310
Helix 32	AD5	C	670	674	Right-handed 310
Helix 33	AD6	C	675	687	Right-handed alpha
Helix 34	AD7	C	704	712	Right-handed alpha
Helix 35	AD8	C	820	825	Right-handed alpha
Helix 36	AD9	C	860	864	Right-handed 310
Helix 37	AE1	C	896	907	Right-handed alpha
Helix 38	AE2	C	942	980	Right-handed alpha
Helix 39	AE3	C	985	990	Right-handed alpha
Helix 40	AE4	C	993	997	Right-handed 310
Helix 41	AE5	C	1006	1037	Right-handed alpha
Helix 42	AE6	C	1081	1085	Right-handed 310
Helix 43	AE7	C	1099	1103	Right-handed 310
Helix 44	AE8	C	1109	1134	Right-handed alpha
Helix 45	AE9	C	1137	1151	Right-handed alpha
Helix 46	AF1	C	1165	1176	Right-handed alpha
Helix 47	AF2	C	1191	1202	Right-handed alpha
Helix 48	AF3	C	1271	1281	Right-handed alpha
Helix 49	AF4	C	1283	1292	Right-handed alpha
Helix 50	AF5	C	1297	1310	Right-handed alpha
Helix 51	AF6	C	1320	1331	Right-handed alpha
Helix 52	AF7	D	26	34	Right-handed alpha
Helix 53	AF8	D	58	63	Right-handed alpha
Helix 54	AF9	D	77	81	Right-handed 310
Helix 55	AG1	D	94	100	Right-handed 310
Helix 56	AG2	D	114	119	Right-handed alpha
Helix 57	AG3	D	122	129	Right-handed alpha
Helix 58	AG4	D	131	139	Right-handed alpha
Helix 59	AG5	D	161	173	Right-handed alpha
Helix 60	AG6	D	181	192	Right-handed alpha
Helix 61	AG7	D	193	207	Right-handed alpha
Helix 62	AG8	D	210	230	Right-handed alpha
Helix 63	AG9	D	233	236	Right-handed 310
Helix 64	AH1	D	263	286	Right-handed alpha
Helix 65	AH2	D	288	308	Right-handed alpha
Helix 66	AH3	D	326	332	Right-handed alpha
Helix 67	AH4	D	336	341	Right-handed alpha
Helix 68	AH5	D	370	377	Right-handed alpha
Helix 69	AH6	D	377	388	Right-handed alpha
Helix 70	AH7	D	393	404	Right-handed alpha
Helix 71	AH8	D	405	416	Right-handed alpha
Helix 72	AH9	D	430	432	Right-handed 310
Helix 73	AI1	D	450	452	Right-handed 310
Helix 74	AI2	D	453	458	Right-handed alpha
Helix 75	AI3	D	473	483	Right-handed alpha
Helix 76	AI4	D	503	514	Right-handed alpha
Helix 77	AI5	D	529	539	Right-handed alpha
Helix 78	AI6	D	574	581	Right-handed alpha
Helix 79	AI7	D	588	592	Right-handed 310
Helix 80	AI8	D	597	612	Right-handed alpha
Helix 81	AI9	D	613	634	Right-handed alpha
Helix 82	AJ1	D	649	670	Right-handed alpha
Helix 83	AJ2	D	674	703	Right-handed alpha
Helix 84	AJ3	D	720	728	Right-handed alpha
Helix 85	AJ4	D	733	742	Right-handed alpha
Helix 86	AJ5	D	768	805	Right-handed alpha
Helix 87	AJ6	D	835	840	Right-handed alpha
Helix 88	AJ7	D	865	875	Right-handed alpha
Helix 89	AJ8	D	884	888	Right-handed 310
Helix 90	AJ9	D	896	900	Right-handed alpha
Helix 91	AK1	D	914	925	Right-handed alpha
Helix 92	AK2	D	926	930	Right-handed 310
Helix 93	AK3	D	1137	1146	Right-handed alpha
Helix 94	AK4	D	1216	1224	Right-handed alpha
Helix 95	AK5	D	1225	1244	Right-handed alpha
Helix 96	AK6	D	1250	1261	Right-handed alpha
Helix 97	AK7	D	1282	1294	Right-handed alpha
Helix 98	AK8	D	1308	1314	Right-handed alpha
Helix 99	AK9	D	1318	1326	Right-handed alpha
Helix 100	AL1	D	1327	1339	Right-handed alpha
Helix 101	AL2	D	1347	1353	Right-handed alpha
Helix 102	AL3	D	1359	1361	Right-handed 310
Helix 103	AL4	D	1362	1373	Right-handed alpha
Helix 104	AL5	E	6	13	Right-handed alpha
Helix 105	AL6	E	16	32	Right-handed alpha
Helix 106	AL7	E	45	56	Right-handed alpha
Helix 107	AL8	E	60	77	Right-handed alpha
Helix 108	AL9	F	96	107	Right-handed alpha
Helix 109	AM1	F	112	136	Right-handed alpha
Helix 110	AM2	F	137	153	Right-handed alpha
Helix 111	AM3	F	213	233	Right-handed alpha
Helix 112	AM4	F	247	257	Right-handed alpha
Helix 113	AM5	F	262	292	Right-handed alpha
Helix 114	AM6	F	299	307	Right-handed alpha
Helix 115	AM7	F	313	317	Right-handed 310
Helix 116	AM8	F	319	323	Right-handed 310
Helix 117	AM9	F	325	330	Right-handed alpha
Helix 118	AN1	F	331	334	Right-handed 310
Helix 119	AN2	F	337	351	Right-handed alpha
Helix 120	AN3	F	354	383	Right-handed alpha
Helix 121	AN4	F	383	392	Right-handed alpha
Helix 122	AN5	F	393	395	Right-handed 310
Helix 123	AN6	F	400	418	Right-handed alpha
Helix 124	AN7	F	420	424	Right-handed 310
Helix 125	AN8	F	426	447	Right-handed alpha
Helix 126	AN9	F	453	475	Right-handed alpha
Helix 127	AO1	F	479	487	Right-handed alpha
Helix 128	AO2	F	490	501	Right-handed alpha
Helix 129	AO3	F	510	514	Right-handed 310
Helix 130	AO4	F	530	550	Right-handed alpha
Helix 131	AO5	F	552	563	Right-handed alpha
Helix 132	AO6	F	572	581	Right-handed alpha
Helix 133	AO7	F	583	599	Right-handed alpha
Helix 134	AO8	F	604	609	Right-handed alpha

There are 49 sheets in PDB entry 6XLL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	20	first strand
Strand 2	A	23	31	anti-parallel
Strand 3	A	199	207	anti-parallel
Strand 4	A	180	189	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	105	first strand
Strand 2	A	139	150	anti-parallel
Strand 3	A	52	61	anti-parallel
Strand 4	A	171	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	121	123	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	129	133	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	153	first strand
Strand 2	A	175	176	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	14	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	17	20	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	14	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	195	207	anti-parallel
Strand 4	B	180	192	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	105	first strand
Strand 2	B	139	150	anti-parallel
Strand 3	B	52	61	anti-parallel
Strand 4	B	171	172	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	121	123	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	131	133	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	175	176	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel
Strand 3	C	700	701	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	66	75	anti-parallel
Strand 3	C	93	105	anti-parallel
Strand 4	C	114	128	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	138	first strand
Strand 2	C	141	145	anti-parallel
Strand 3	C	512	514	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	454	first strand
Strand 2	C	147	151	anti-parallel
Strand 3	C	529	531	parallel
Strand 4	C	572	574	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	160	first strand
Strand 2	C	171	177	anti-parallel
Strand 3	C	184	188	anti-parallel
Strand 4	C	194	198	anti-parallel
Strand 5	C	204	205	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	231	first strand
Strand 2	C	332	336	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	240	first strand
Strand 2	C	284	286	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	251	first strand
Strand 2	C	267	268	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	303	first strand
Strand 2	C	308	311	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	599	607	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	652	654	anti-parallel
Strand 4	C	616	617	parallel
Strand 5	C	633	637	anti-parallel
Strand 6	C	642	646	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	782	784	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	748	752	first strand
Strand 2	C	731	736	anti-parallel
Strand 3	C	722	728	anti-parallel
Strand 4	C	776	777	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	757	758	first strand
Strand 2	C	764	765	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	790	first strand
Strand 2	C	793	794	anti-parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1209	1210	first strand
Strand 2	C	1225	1234	anti-parallel
Strand 3	C	1065	1067	anti-parallel
Strand 4	C	1074	1080	anti-parallel
Strand 5	C	815	819	parallel
Strand 6	C	1096	1098	anti-parallel
Strand 7	C	798	804	parallel
Strand 8	C	1225	1234	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	846	847	first strand
Strand 2	C	830	843	anti-parallel
Strand 3	C	1046	1058	anti-parallel
Strand 4	C	926	935	anti-parallel
Strand 5	C	876	877	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	849	850	first strand
Strand 2	C	886	889	anti-parallel
Strand 3	C	913	915	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	884	first strand
Strand 2	C	918	919	anti-parallel

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There are 8 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	356	anti-parallel
Strand 3	D	465	469	anti-parallel
Strand 4	D	421	424	anti-parallel
Strand 5	D	434	442	anti-parallel
Strand 6	D	365	369	parallel
Strand 7	D	447	448	anti-parallel
Strand 8	D	350	356	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1268	1270	first strand
Strand 2	D	345	347	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1337	first strand
Strand 2	D	20	24	anti-parallel
Strand 3	D	1341	1342	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	112	first strand
Strand 2	D	238	244	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	160	first strand
Strand 2	D	144	148	anti-parallel
Strand 3	D	177	179	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	253	254	first strand
Strand 2	D	260	262	anti-parallel
Strand 3	F	505	506	parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	527	first strand
Strand 2	D	547	557	parallel
Strand 3	D	563	573	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	709	first strand
Strand 2	D	712	715	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	809	811	first strand
Strand 2	D	894	895	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	882	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	825	827	first strand
Strand 2	D	830	833	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	848	849	first strand
Strand 2	D	856	858	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	949	951	first strand
Strand 2	D	1016	1019	anti-parallel
Strand 3	D	1002	1003	anti-parallel
Strand 4	D	973	975	anti-parallel
Strand 5	D	965	967	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	957	961	first strand
Strand 2	D	981	985	anti-parallel
Strand 3	D	991	996	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1024	1028	first strand
Strand 2	D	1120	1125	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1099	1100	first strand
Strand 2	D	1077	1081	anti-parallel
Strand 3	D	1033	1038	anti-parallel
Strand 4	D	1114	1115	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1046	1049	first strand
Strand 2	D	1058	1061	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1162	1165	first strand
Strand 2	D	1175	1178	anti-parallel
Strand 3	D	1187	1188	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1279	1281	first strand
Strand 2	D	1263	1268	anti-parallel
Strand 3	D	1301	1305	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XLL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XLL