Analysis of interatomic Contacts of Structural Units in PDB entry:
6XLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XLT entry

There is 1 chain in PDB entry 6XLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLN 639
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6XLT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 31Right-handed 310
Helix 2
AA2
A
43 47Right-handed 310
Helix 3
AA3
A
317 321Right-handed 310
Helix 4
AA4
A
327 332Right-handed alpha
Helix 5
AA5
A
341 343Right-handed 310
Helix 6
AA6
A
530 534Right-handed 310
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There are 12 sheets in PDB entry 6XLT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
142 147anti-parallel
Strand 3
A
53 71anti-parallel
Strand 4
A
15 18anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
142 147anti-parallel
Strand 3
A
53 71anti-parallel
Strand 4
A
112 128anti-parallel
Strand 5
A
84 90anti-parallel
Strand 6
A
101 104anti-parallel
Strand 7
A
160 166parallel
Strand 8
A
524 529anti-parallel
Strand 9
A
507 511anti-parallel
Strand 10
A
497 501anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
139 140anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 219first strand
Strand 2
A
202 207anti-parallel
Strand 3
A
183 186anti-parallel
Strand 4
A
173 176anti-parallel
Strand 5
A
578 580anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 233first strand
Strand 2
A
238 242anti-parallel
Strand 3
A
250 254anti-parallel
Strand 4
A
259 262anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 277first strand
Strand 2
A
283 286anti-parallel
Strand 3
A
299 303anti-parallel
Strand 4
A
308 312anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 339first strand
Strand 2
A
345 347anti-parallel
Strand 3
A
353 358anti-parallel
Strand 4
A
364 370anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
376 377anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 390first strand
Strand 2
A
395 399anti-parallel
Strand 3
A
414 418anti-parallel
Strand 4
A
427 430anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 446first strand
Strand 2
A
452 455anti-parallel
Strand 3
A
474 477anti-parallel
Strand 4
A
482 485anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 549first strand
Strand 2
A
559 564anti-parallel
Strand 3
A
601 605anti-parallel
Strand 4
A
595 598anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 555first strand
Strand 2
A
633 638parallel
Strand 3
A
616 623anti-parallel
Strand 4
A
570 575anti-parallel
Strand 5
A
589 591anti-parallel
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