Analysis of interatomic Contacts of Structural Units in PDB entry:
6XM1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XM1 entry

There are 3 chains in PDB entry 6XM1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 609
B
 GLY -1THR 304
C
 MET 1GLY 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 6XM1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
39 48Right-handed alpha
Helix 3
AA3
A
49 55Right-handed alpha
Helix 4
AA4
A
84 97Right-handed alpha
Helix 5
AA5
A
112 123Right-handed alpha
Helix 6
AA6
A
166 184Right-handed alpha
Helix 7
AA7
A
196 213Right-handed alpha
Helix 8
AA8
A
234 236Right-handed 310
Helix 9
AA9
A
238 242Right-handed 310
Helix 10
AB1
A
246 255Right-handed alpha
Helix 11
AB2
A
271 274Right-handed 310
Helix 12
AB3
A
284 291Right-handed alpha
Helix 13
AB4
A
294 313Right-handed alpha
Helix 14
AB5
A
315 319Right-handed 310
Helix 15
AB6
A
321 360Right-handed alpha
Helix 16
AB7
A
360 374Right-handed alpha
Helix 17
AB8
A
376 388Right-handed alpha
Helix 18
AB9
A
394 410Right-handed alpha
Helix 19
AC1
A
416 426Right-handed alpha
Helix 20
AC2
A
431 447Right-handed alpha
Helix 21
AC3
A
493 497Right-handed 310
Helix 22
AC4
A
500 511Right-handed alpha
Helix 23
AC5
A
559 573Right-handed alpha
Helix 24
AC6
A
587 601Right-handed alpha
Helix 25
AC7
B
5 12Right-handed alpha
Helix 26
AC8
B
83 108Right-handed alpha
Helix 27
AC9
B
123 131Right-handed alpha
Helix 28
AD1
B
132 160Right-handed alpha
Helix 29
AD2
B
164 200Right-handed alpha
Helix 30
AD3
B
252 283Right-handed alpha
Helix 31
AD4
B
290 293Right-handed 310
Helix 32
AD5
B
294 301Right-handed alpha
Helix 33
AD6
C
2 15Right-handed alpha
Helix 34
AD7
C
39 48Right-handed alpha
Helix 35
AD8
C
49 55Right-handed alpha
Helix 36
AD9
C
84 97Right-handed alpha
Helix 37
AE1
C
112 123Right-handed alpha
Helix 38
AE2
C
166 184Right-handed alpha
Helix 39
AE3
C
196 213Right-handed alpha
Helix 40
AE4
C
234 236Right-handed 310
Helix 41
AE5
C
238 242Right-handed 310
Helix 42
AE6
C
246 255Right-handed alpha
Helix 43
AE7
C
271 274Right-handed 310
Helix 44
AE8
C
284 291Right-handed alpha
Helix 45
AE9
C
294 313Right-handed alpha
Helix 46
AF1
C
315 319Right-handed 310
Helix 47
AF2
C
323 360Right-handed alpha
Helix 48
AF3
C
360 374Right-handed alpha
Helix 49
AF4
C
376 389Right-handed alpha
Helix 50
AF5
C
394 410Right-handed alpha
Helix 51
AF6
C
416 426Right-handed alpha
Helix 52
AF7
C
431 447Right-handed alpha
Helix 53
AF8
C
471 476Right-handed alpha
Helix 54
AF9
C
493 497Right-handed 310
Helix 55
AG1
C
500 512Right-handed alpha
Helix 56
AG2
C
559 573Right-handed alpha
Helix 57
AG3
C
587 601Right-handed alpha
Helix 58
AG4
D
5 12Right-handed alpha
Helix 59
AG5
D
83 108Right-handed alpha
Helix 60
AG6
D
123 131Right-handed alpha
Helix 61
AG7
D
132 160Right-handed alpha
Helix 62
AG8
D
164 200Right-handed alpha
Helix 63
AG9
D
253 283Right-handed alpha
Helix 64
AH1
D
290 293Right-handed 310
Helix 65
AH2
D
294 301Right-handed alpha
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There are 6 sheets in PDB entry 6XM1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
32 36parallel
Strand 3
A
76 81parallel
Strand 4
A
102 107parallel
Strand 5
A
128 134parallel
Strand 6
B
2 4anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 142first strand
Strand 2
A
145 147anti-parallel
Strand 3
A
576 582parallel
Strand 4
A
548 555parallel
Strand 5
A
227 232parallel
Strand 6
A
189 192parallel
Strand 7
A
521 523anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
261 263anti-parallel
Strand 3
A
276 278anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
31 36parallel
Strand 3
C
75 81parallel
Strand 4
C
102 107parallel
Strand 5
C
128 134parallel
Strand 6
D
2 4anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 142first strand
Strand 2
C
145 147anti-parallel
Strand 3
C
576 582parallel
Strand 4
C
548 555parallel
Strand 5
C
227 232parallel
Strand 6
C
189 192parallel
Strand 7
C
521 523anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
257 258first strand
Strand 2
C
261 263anti-parallel
Strand 3
C
276 278anti-parallel
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