Analysis of interatomic Contacts of Structural Units in PDB entry:
6XM2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XM2 entry

There are 12 chains in PDB entry 6XM2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	GLU 218
B	GLN 2	PRO 225
C	ALA 2	GLY 217
D	GLN 2	PRO 225
E	ALA 2	CYS 219
F	GLN 2	ASP 229
G	GLU 1	GLU 218
H	GLN 2	PRO 225
I	ALA 303	SER 414
J	ALA 303	SER 414
K	ALA 303	SER 414
L	ALA 303	SER 414

There are 45 helices in PDB entry 6XM2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	33	Right-handed 310
Helix 2	AA2	A	81	85	Right-handed 310
Helix 3	AA3	A	128	132	Right-handed 310
Helix 4	AA4	A	188	192	Right-handed alpha
Helix 5	AA5	B	61	64	Right-handed 310
Helix 6	AA6	B	86	90	Right-handed 310
Helix 7	AA7	B	168	170	Right-handed 310
Helix 8	AA8	B	199	201	Right-handed 310
Helix 9	AA9	B	213	216	Right-handed 310
Helix 10	AB1	C	29	33	Right-handed 310
Helix 11	AB2	C	81	85	Right-handed 310
Helix 12	AB3	C	126	131	Right-handed alpha
Helix 13	AB4	C	188	193	Right-handed alpha
Helix 14	AB5	D	61	64	Right-handed 310
Helix 15	AB6	D	86	90	Right-handed 310
Helix 16	AB7	E	29	33	Right-handed 310
Helix 17	AB8	E	81	85	Right-handed 310
Helix 18	AB9	E	127	132	Right-handed 310
Helix 19	AC1	E	188	194	Right-handed alpha
Helix 20	AC2	F	61	64	Right-handed 310
Helix 21	AC3	F	73	75	Right-handed 310
Helix 22	AC4	F	86	89	Right-handed 310
Helix 23	AC5	F	168	170	Right-handed 310
Helix 24	AC6	F	213	216	Right-handed 310
Helix 25	AC7	G	29	33	Right-handed 310
Helix 26	AC8	G	81	85	Right-handed 310
Helix 27	AC9	G	126	131	Right-handed alpha
Helix 28	AD1	G	188	193	Right-handed alpha
Helix 29	AD2	H	61	64	Right-handed 310
Helix 30	AD3	H	73	75	Right-handed 310
Helix 31	AD4	H	86	90	Right-handed 310
Helix 32	AD5	H	168	170	Right-handed 310
Helix 33	AD6	H	197	201	Right-handed 310
Helix 34	AD7	H	213	216	Right-handed 310
Helix 35	AD8	I	306	310	Right-handed alpha
Helix 36	AD9	I	326	331	Right-handed alpha
Helix 37	AE1	I	358	371	Right-handed alpha
Helix 38	AE2	J	305	310	Right-handed alpha
Helix 39	AE3	J	326	330	Right-handed alpha
Helix 40	AE4	J	358	371	Right-handed alpha
Helix 41	AE5	K	306	310	Right-handed alpha
Helix 42	AE6	K	359	371	Right-handed alpha
Helix 43	AE7	L	306	310	Right-handed alpha
Helix 44	AE8	L	326	331	Right-handed alpha
Helix 45	AE9	L	358	371	Right-handed alpha

There are 60 sheets in PDB entry 6XM2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	7	first strand
Strand 2	A	19	25	anti-parallel
Strand 3	A	72	77	anti-parallel
Strand 4	A	64	69	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	107	111	parallel
Strand 3	A	86	93	anti-parallel
Strand 4	A	35	40	anti-parallel
Strand 5	A	47	51	anti-parallel
Strand 6	A	55	56	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	107	111	parallel
Strand 3	A	86	93	anti-parallel
Strand 4	A	101	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	123	first strand
Strand 2	A	134	144	anti-parallel
Strand 3	A	178	187	anti-parallel
Strand 4	A	164	168	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	159	first strand
Strand 2	A	150	155	anti-parallel
Strand 3	A	196	202	anti-parallel
Strand 4	A	210	215	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	77	82	anti-parallel
Strand 4	B	67	72	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	119	123	parallel
Strand 3	B	91	98	anti-parallel
Strand 4	B	34	39	anti-parallel
Strand 5	B	46	51	anti-parallel
Strand 6	B	57	59	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	119	123	parallel
Strand 3	B	91	98	anti-parallel
Strand 4	B	112	115	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	140	first strand
Strand 2	B	147	157	anti-parallel
Strand 3	B	188	197	anti-parallel
Strand 4	B	175	177	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	140	first strand
Strand 2	B	147	157	anti-parallel
Strand 3	B	188	197	anti-parallel
Strand 4	B	181	182	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	166	first strand
Strand 2	B	207	212	anti-parallel
Strand 3	B	217	222	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	19	25	anti-parallel
Strand 3	C	72	77	anti-parallel
Strand 4	C	64	69	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	107	111	parallel
Strand 3	C	86	93	anti-parallel
Strand 4	C	35	40	anti-parallel
Strand 5	C	47	51	anti-parallel
Strand 6	C	55	56	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	107	111	parallel
Strand 3	C	86	93	anti-parallel
Strand 4	C	101	103	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	123	first strand
Strand 2	C	134	144	anti-parallel
Strand 3	C	178	187	anti-parallel
Strand 4	C	164	168	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	159	first strand
Strand 2	C	150	155	anti-parallel
Strand 3	C	196	202	anti-parallel
Strand 4	C	210	215	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	77	82	anti-parallel
Strand 4	D	67	72	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	119	123	parallel
Strand 3	D	91	98	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	57	59	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	119	123	parallel
Strand 3	D	91	98	anti-parallel
Strand 4	D	112	115	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	136	first strand
Strand 2	D	148	157	anti-parallel
Strand 3	D	188	196	anti-parallel
Strand 4	D	175	177	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	136	first strand
Strand 2	D	148	157	anti-parallel
Strand 3	D	188	196	anti-parallel
Strand 4	D	181	182	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	166	first strand
Strand 2	D	206	212	anti-parallel
Strand 3	D	217	223	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	19	25	anti-parallel
Strand 3	E	72	77	anti-parallel
Strand 4	E	64	69	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	107	111	parallel
Strand 3	E	87	93	anti-parallel
Strand 4	E	35	40	anti-parallel
Strand 5	E	47	51	anti-parallel
Strand 6	E	55	56	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	107	111	parallel
Strand 3	E	87	93	anti-parallel
Strand 4	E	101	103	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	119	123	first strand
Strand 2	E	134	144	anti-parallel
Strand 3	E	178	187	anti-parallel
Strand 4	E	164	168	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	159	first strand
Strand 2	E	150	155	anti-parallel
Strand 3	E	196	202	anti-parallel
Strand 4	E	210	215	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	18	25	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	72	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	119	123	parallel
Strand 3	F	91	98	anti-parallel
Strand 4	F	34	40	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	57	59	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	119	123	parallel
Strand 3	F	91	98	anti-parallel
Strand 4	F	112	115	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	132	136	first strand
Strand 2	F	149	157	anti-parallel
Strand 3	F	188	195	anti-parallel
Strand 4	F	175	177	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	132	136	first strand
Strand 2	F	149	157	anti-parallel
Strand 3	F	188	195	anti-parallel
Strand 4	F	181	182	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	163	166	first strand
Strand 2	F	207	212	anti-parallel
Strand 3	F	217	222	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	19	25	anti-parallel
Strand 3	G	72	77	anti-parallel
Strand 4	G	64	69	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	107	111	parallel
Strand 3	G	87	93	anti-parallel
Strand 4	G	35	40	anti-parallel
Strand 5	G	47	51	anti-parallel
Strand 6	G	55	56	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	107	111	parallel
Strand 3	G	87	93	anti-parallel
Strand 4	G	101	103	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	119	123	first strand
Strand 2	G	134	144	anti-parallel
Strand 3	G	178	187	anti-parallel
Strand 4	G	164	168	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	159	first strand
Strand 2	G	149	155	anti-parallel
Strand 3	G	196	203	anti-parallel
Strand 4	G	210	215	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	119	123	parallel
Strand 3	H	91	98	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	119	123	parallel
Strand 3	H	91	98	anti-parallel
Strand 4	H	112	115	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	132	136	first strand
Strand 2	H	148	157	anti-parallel
Strand 3	H	188	196	anti-parallel
Strand 4	H	175	177	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	132	136	first strand
Strand 2	H	148	157	anti-parallel
Strand 3	H	188	196	anti-parallel
Strand 4	H	181	182	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	163	166	first strand
Strand 2	H	207	212	anti-parallel
Strand 3	H	217	222	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	304	305	first strand
Strand 2	I	410	413	anti-parallel
Strand 3	I	380	382	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	318	320	first strand
Strand 2	I	345	347	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	323	325	first strand
Strand 2	I	340	342	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	385	394	first strand
Strand 2	I	397	408	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	318	320	first strand
Strand 2	J	345	347	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	323	325	first strand
Strand 2	J	340	342	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	335	337	first strand
Strand 2	J	385	394	anti-parallel
Strand 3	J	397	408	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	379	382	first strand
Strand 2	J	411	414	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	304	305	first strand
Strand 2	K	410	414	anti-parallel
Strand 3	K	379	382	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	318	320	first strand
Strand 2	K	345	347	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	323	325	first strand
Strand 2	K	340	342	anti-parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	335	337	first strand
Strand 2	K	385	394	anti-parallel
Strand 3	K	397	408	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	304	305	first strand
Strand 2	L	410	414	anti-parallel
Strand 3	L	379	382	anti-parallel

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There are 2 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	318	320	first strand
Strand 2	L	345	347	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	323	325	first strand
Strand 2	L	340	342	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	385	394	first strand
Strand 2	L	397	408	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XM2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XM2