Analysis of interatomic Contacts of Structural Units in PDB entry:
6XMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XMR entry

There are 2 chains in PDB entry 6XMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1PHE 362
B
MET 1PHE 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 6XMR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
23 32Right-handed alpha
Helix 3
AA3
A
60 67Right-handed alpha
Helix 4
AA4
A
81 90Right-handed alpha
Helix 5
AA5
A
105 117Right-handed alpha
Helix 6
AA6
A
124 133Right-handed alpha
Helix 7
AA7
A
136 163Right-handed alpha
Helix 8
AA8
A
168 183Right-handed alpha
Helix 9
AA9
A
198 202Right-handed 310
Helix 10
AB1
A
243 264Right-handed alpha
Helix 11
AB2
A
269 285Right-handed alpha
Helix 12
AB3
A
286 290Right-handed 310
Helix 13
AB4
B
2 15Right-handed alpha
Helix 14
AB5
B
23 32Right-handed alpha
Helix 15
AB6
B
60 68Right-handed alpha
Helix 16
AB7
B
81 90Right-handed alpha
Helix 17
AB8
B
105 117Right-handed alpha
Helix 18
AB9
B
124 133Right-handed alpha
Helix 19
AC1
B
136 163Right-handed alpha
Helix 20
AC2
B
168 183Right-handed alpha
Helix 21
AC3
B
198 202Right-handed 310
Helix 22
AC4
B
243 264Right-handed alpha
Helix 23
AC5
B
269 284Right-handed alpha
Helix 24
AC6
B
286 290Right-handed 310
Back to top of page

There are 14 sheets in PDB entry 6XMR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
18 19first strand
Strand 2
A
96 99parallel
Strand 3
A
120 123parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
43 45first strand
Strand 2
A
53 57anti-parallel
Strand 3
A
72 76parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
193 196first strand
Strand 2
A
216 222anti-parallel
Strand 3
A
233 239anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
225 226first strand
Strand 2
A
229 230anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
295 297first strand
Strand 2
A
304 308anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
321 324first strand
Strand 2
A
340 345anti-parallel
Strand 3
A
348 351anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
327 330first strand
Strand 2
A
334 337anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
18 19first strand
Strand 2
B
96 99parallel
Strand 3
B
120 123parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
43 45first strand
Strand 2
B
53 57anti-parallel
Strand 3
B
72 76parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
187 188first strand
Strand 2
B
224 226anti-parallel
Strand 3
B
229 230anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
193 196first strand
Strand 2
B
216 222anti-parallel
Strand 3
B
233 239anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
295 297first strand
Strand 2
B
304 308anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
321 324first strand
Strand 2
B
340 344anti-parallel
Strand 3
B
349 351anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
327 330first strand
Strand 2
B
334 337anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il