Analysis of interatomic Contacts of Structural Units in PDB entry:
6XMT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XMT entry

There is 1 chain in PDB entry 6XMT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LYS 1211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6XMT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 44Right-handed alpha
Helix 2
AA2
A
57 74Right-handed alpha
Helix 3
AA3
A
75 77Right-handed 310
Helix 4
AA4
A
78 86Right-handed alpha
Helix 5
AA5
A
156 162Right-handed alpha
Helix 6
AA6
A
172 178Right-handed alpha
Helix 7
AA7
A
188 197Right-handed alpha
Helix 8
AA8
A
199 214Right-handed alpha
Helix 9
AA9
A
218 247Right-handed alpha
Helix 10
AB1
A
332 336Right-handed 310
Helix 11
AB2
A
372 375Right-handed 310
Helix 12
AB3
A
376 388Right-handed alpha
Helix 13
AB4
A
396 425Right-handed alpha
Helix 14
AB5
A
427 441Right-handed alpha
Helix 15
AB6
A
446 463Right-handed alpha
Helix 16
AB7
A
471 480Right-handed 310
Helix 17
AB8
A
522 532Right-handed alpha
Helix 18
AB9
A
546 557Right-handed alpha
Helix 19
AC1
A
606 612Right-handed alpha
Helix 20
AC2
A
620 630Right-handed alpha
Helix 21
AC3
A
655 660Right-handed alpha
Helix 22
AC4
A
678 688Right-handed alpha
Helix 23
AC5
A
700 712Right-handed alpha
Helix 24
AC6
A
753 758Right-handed alpha
Helix 25
AC7
A
766 772Right-handed alpha
Helix 26
AC8
A
778 784Right-handed alpha
Helix 27
AC9
A
795 808Right-handed alpha
Helix 28
AD1
A
820 827Right-handed alpha
Helix 29
AD2
A
837 854Right-handed alpha
Helix 30
AD3
A
972 1010Right-handed alpha
Helix 31
AD4
A
1018 1035Right-handed alpha
Helix 32
AD5
A
1055 1084Right-handed alpha
Helix 33
AD6
A
1099 1119Right-handed alpha
Helix 34
AD7
A
1133 1152Right-handed alpha
Helix 35
AD8
A
1155 1162Right-handed alpha
Helix 36
AD9
A
1169 1197Right-handed alpha
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There are 10 sheets in PDB entry 6XMT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
12 20anti-parallel
Strand 3
A
98 103anti-parallel
Strand 4
A
111 114anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
123 124anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 130first strand
Strand 2
A
133 138anti-parallel
Strand 3
A
143 144anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 267first strand
Strand 2
A
256 260anti-parallel
Strand 3
A
277 280anti-parallel
Strand 4
A
365 371anti-parallel
Strand 5
A
292 295anti-parallel
Strand 6
A
338 339anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 316first strand
Strand 2
A
299 303anti-parallel
Strand 3
A
344 349anti-parallel
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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 469first strand
Strand 2
A
964 966anti-parallel
Strand 3
A
830 833parallel
Strand 4
A
813 815parallel
Strand 5
A
483 486parallel
Strand 6
A
692 696parallel
Strand 7
A
786 789parallel
Strand 8
A
762 765parallel
Strand 9
A
718 723parallel
Strand 10
A
732 736anti-parallel
Strand 11
A
742 744anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 501first strand
Strand 2
A
670 672anti-parallel
Strand 3
A
634 635anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 537first strand
Strand 2
A
543 544anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
559 560first strand
Strand 2
A
566 567anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 579first strand
Strand 2
A
591 594anti-parallel
Strand 3
A
599 605anti-parallel
Strand 4
A
637 642anti-parallel
Strand 5
A
664 667anti-parallel
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