Analysis of interatomic Contacts of Structural Units in PDB entry:
6XN3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XN3 entry

There are 12 chains in PDB entry 6XN3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 756
B	MET 1	SER 296
F	MET 1	ALA 214
H	MET 1	ALA 214
G	MET 1	ALA 214
I	MET 1	ALA 214
J	MET 1	LEU 352
R	A 1	C 37
C	THR 12	ASP 150
D	THR 12	TYR 146
E	ILE 16	TYR 146
T	A 5	G 38

There are 91 helices in PDB entry 6XN3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	12	Right-handed alpha
Helix 2	AA2	A	14	21	Right-handed alpha
Helix 3	AA3	A	28	38	Right-handed alpha
Helix 4	AA4	A	45	54	Right-handed alpha
Helix 5	AA5	A	56	63	Right-handed alpha
Helix 6	AA6	A	73	85	Right-handed alpha
Helix 7	AA7	A	109	113	Right-handed 310
Helix 8	AA8	A	115	120	Right-handed alpha
Helix 9	AA9	A	150	165	Right-handed alpha
Helix 10	AB1	A	166	168	Right-handed 310
Helix 11	AB2	A	174	186	Right-handed alpha
Helix 12	AB3	A	202	225	Right-handed alpha
Helix 13	AB4	A	228	235	Right-handed alpha
Helix 14	AB5	A	257	262	Right-handed alpha
Helix 15	AB6	A	268	295	Right-handed alpha
Helix 16	AB7	A	298	300	Right-handed 310
Helix 17	AB8	A	317	339	Right-handed alpha
Helix 18	AB9	A	364	381	Right-handed alpha
Helix 19	AC1	A	384	394	Right-handed alpha
Helix 20	AC2	A	418	430	Right-handed alpha
Helix 21	AC3	A	461	465	Right-handed 310
Helix 22	AC4	A	499	507	Right-handed alpha
Helix 23	AC5	A	523	530	Right-handed alpha
Helix 24	AC6	A	538	564	Right-handed alpha
Helix 25	AC7	A	584	602	Right-handed alpha
Helix 26	AC8	A	620	638	Right-handed alpha
Helix 27	AC9	A	662	684	Right-handed alpha
Helix 28	AD1	A	689	702	Right-handed alpha
Helix 29	AD2	A	705	720	Right-handed alpha
Helix 30	AD3	A	720	725	Right-handed alpha
Helix 31	AD4	A	725	739	Right-handed alpha
Helix 32	AD5	A	739	755	Right-handed alpha
Helix 33	AD6	B	27	43	Right-handed alpha
Helix 34	AD7	B	44	54	Right-handed alpha
Helix 35	AD8	B	102	107	Right-handed alpha
Helix 36	AD9	B	163	174	Right-handed alpha
Helix 37	AE1	B	199	205	Right-handed alpha
Helix 38	AE2	B	222	227	Right-handed alpha
Helix 39	AE3	F	45	61	Right-handed alpha
Helix 40	AE4	F	74	82	Right-handed alpha
Helix 41	AE5	F	103	110	Right-handed alpha
Helix 42	AE6	F	157	174	Right-handed alpha
Helix 43	AE7	F	180	184	Right-handed 310
Helix 44	AE8	F	204	213	Right-handed alpha
Helix 45	AE9	H	45	61	Right-handed alpha
Helix 46	AF1	H	69	73	Right-handed 310
Helix 47	AF2	H	74	82	Right-handed alpha
Helix 48	AF3	H	103	109	Right-handed alpha
Helix 49	AF4	H	157	173	Right-handed alpha
Helix 50	AF5	H	205	213	Right-handed alpha
Helix 51	AF6	G	45	61	Right-handed alpha
Helix 52	AF7	G	74	82	Right-handed alpha
Helix 53	AF8	G	103	110	Right-handed alpha
Helix 54	AF9	G	154	156	Right-handed 310
Helix 55	AG1	G	157	174	Right-handed alpha
Helix 56	AG2	G	204	213	Right-handed alpha
Helix 57	AG3	I	45	61	Right-handed alpha
Helix 58	AG4	I	69	73	Right-handed 310
Helix 59	AG5	I	74	82	Right-handed alpha
Helix 60	AG6	I	103	111	Right-handed alpha
Helix 61	AG7	I	157	172	Right-handed alpha
Helix 62	AG8	I	205	213	Right-handed alpha
Helix 63	AG9	J	41	51	Right-handed alpha
Helix 64	AH1	J	53	65	Right-handed alpha
Helix 65	AH2	J	71	76	Right-handed alpha
Helix 66	AH3	J	127	140	Right-handed alpha
Helix 67	AH4	J	152	154	Right-handed 310
Helix 68	AH5	J	165	167	Right-handed 310
Helix 69	AH6	J	209	228	Right-handed alpha
Helix 70	AH7	J	228	235	Right-handed alpha
Helix 71	AH8	J	238	242	Right-handed 310
Helix 72	AH9	J	275	280	Right-handed alpha
Helix 73	AI1	J	286	300	Right-handed alpha
Helix 74	AI2	C	25	38	Right-handed alpha
Helix 75	AI3	C	53	72	Right-handed alpha
Helix 76	AI4	C	80	101	Right-handed alpha
Helix 77	AI5	C	101	111	Right-handed alpha
Helix 78	AI6	C	113	123	Right-handed alpha
Helix 79	AI7	C	125	146	Right-handed alpha
Helix 80	AI8	D	25	38	Right-handed alpha
Helix 81	AI9	D	53	69	Right-handed alpha
Helix 82	AJ1	D	80	101	Right-handed alpha
Helix 83	AJ2	D	101	111	Right-handed alpha
Helix 84	AJ3	D	112	123	Right-handed alpha
Helix 85	AJ4	D	125	146	Right-handed alpha
Helix 86	AJ5	E	25	39	Right-handed alpha
Helix 87	AJ6	E	55	73	Right-handed alpha
Helix 88	AJ7	E	80	101	Right-handed alpha
Helix 89	AJ8	E	101	111	Right-handed alpha
Helix 90	AJ9	E	112	124	Right-handed alpha
Helix 91	AK1	E	125	146	Right-handed alpha

There are 30 sheets in PDB entry 6XN3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	314	315	first strand
Strand 2	A	245	248	anti-parallel
Strand 3	A	351	353	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	254	255	first strand
Strand 2	A	344	345	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	305	first strand
Strand 2	A	310	312	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	453	first strand
Strand 2	A	437	440	anti-parallel
Strand 3	A	472	475	anti-parallel
Strand 4	A	487	488	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	568	572	first strand
Strand 2	A	579	583	anti-parallel
Strand 3	A	514	520	anti-parallel
Strand 4	A	609	615	anti-parallel
Strand 5	A	652	654	parallel
Strand 6	A	660	661	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	99	first strand
Strand 2	B	69	73	anti-parallel
Strand 3	B	58	66	anti-parallel
Strand 4	B	153	160	anti-parallel
Strand 5	B	2	8	anti-parallel
Strand 6	B	189	192	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	132	first strand
Strand 2	B	140	148	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	185	first strand
Strand 2	F	94	97	parallel
Strand 3	F	145	151	anti-parallel
Strand 4	F	2	11	anti-parallel
Strand 5	F	188	199	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	265	first strand
Strand 2	B	209	212	anti-parallel
Strand 3	B	292	295	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	237	first strand
Strand 2	B	256	259	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	277	first strand
Strand 2	B	284	288	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	43	44	first strand
Strand 2	F	99	100	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	84	first strand
Strand 2	F	89	90	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	123	first strand
Strand 2	F	130	138	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	94	95	first strand
Strand 2	H	143	151	anti-parallel
Strand 3	H	2	11	anti-parallel
Strand 4	H	188	197	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	35	36	first strand
Strand 2	H	41	44	anti-parallel
Strand 3	H	99	100	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	115	123	first strand
Strand 2	H	130	138	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	44	first strand
Strand 2	G	99	101	anti-parallel
Strand 3	G	143	151	anti-parallel
Strand 4	G	94	95	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	44	first strand
Strand 2	G	99	101	anti-parallel
Strand 3	G	143	151	anti-parallel
Strand 4	G	2	11	anti-parallel
Strand 5	G	188	197	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	115	120	first strand
Strand 2	G	133	138	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	143	151	first strand
Strand 2	I	2	11	anti-parallel
Strand 3	I	188	191	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	143	151	first strand
Strand 2	I	2	11	anti-parallel
Strand 3	I	196	197	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	43	44	first strand
Strand 2	I	99	100	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	115	120	first strand
Strand 2	I	133	138	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	156	158	first strand
Strand 2	J	195	203	anti-parallel
Strand 3	J	5	11	anti-parallel
Strand 4	J	344	351	anti-parallel
Strand 5	J	267	269	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	22	23	first strand
Strand 2	J	113	114	anti-parallel
Strand 3	J	181	191	parallel
Strand 4	J	169	177	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	31	first strand
Strand 2	J	36	39	anti-parallel
Strand 3	J	86	89	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	20	22	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	15	first strand
Strand 2	D	20	21	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	43	first strand
Strand 2	D	49	50	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XN3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XN3