Analysis of interatomic Contacts of Structural Units in PDB entry:
6XN5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XN5 entry

There are 8 chains in PDB entry 6XN5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
I	MET 1	ALA 214
F	MET 1	ALA 214
H	MET 1	ALA 214
A	MET 1	GLU 756
B	MET 1	SER 296
G	MET 1	ALA 214
J	MET 1	LEU 352
R	A 1	A 32

There are 66 helices in PDB entry 6XN5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	I	45	61	Right-handed alpha
Helix 2	AA2	I	74	81	Right-handed alpha
Helix 3	AA3	I	103	109	Right-handed alpha
Helix 4	AA4	I	157	173	Right-handed alpha
Helix 5	AA5	I	204	213	Right-handed alpha
Helix 6	AA6	F	45	61	Right-handed alpha
Helix 7	AA7	F	74	82	Right-handed alpha
Helix 8	AA8	F	103	110	Right-handed alpha
Helix 9	AA9	F	154	156	Right-handed 310
Helix 10	AB1	F	157	174	Right-handed alpha
Helix 11	AB2	F	205	213	Right-handed alpha
Helix 12	AB3	H	45	61	Right-handed alpha
Helix 13	AB4	H	74	82	Right-handed alpha
Helix 14	AB5	H	103	110	Right-handed alpha
Helix 15	AB6	H	154	156	Right-handed 310
Helix 16	AB7	H	157	173	Right-handed alpha
Helix 17	AB8	H	205	213	Right-handed alpha
Helix 18	AB9	A	3	13	Right-handed alpha
Helix 19	AC1	A	15	21	Right-handed alpha
Helix 20	AC2	A	28	40	Right-handed alpha
Helix 21	AC3	A	45	54	Right-handed alpha
Helix 22	AC4	A	56	63	Right-handed alpha
Helix 23	AC5	A	72	85	Right-handed alpha
Helix 24	AC6	A	110	113	Right-handed 310
Helix 25	AC7	A	150	166	Right-handed alpha
Helix 26	AC8	A	171	173	Right-handed 310
Helix 27	AC9	A	174	186	Right-handed alpha
Helix 28	AD1	A	202	224	Right-handed alpha
Helix 29	AD2	A	228	235	Right-handed alpha
Helix 30	AD3	A	238	244	Right-handed alpha
Helix 31	AD4	A	256	262	Right-handed alpha
Helix 32	AD5	A	268	271	Right-handed 310
Helix 33	AD6	A	272	295	Right-handed alpha
Helix 34	AD7	A	298	300	Right-handed 310
Helix 35	AD8	A	317	339	Right-handed alpha
Helix 36	AD9	A	353	358	Right-handed alpha
Helix 37	AE1	A	363	381	Right-handed alpha
Helix 38	AE2	A	384	394	Right-handed alpha
Helix 39	AE3	A	418	430	Right-handed alpha
Helix 40	AE4	A	458	463	Right-handed 310
Helix 41	AE5	A	499	507	Right-handed alpha
Helix 42	AE6	A	523	531	Right-handed alpha
Helix 43	AE7	A	533	537	Right-handed 310
Helix 44	AE8	A	538	564	Right-handed alpha
Helix 45	AE9	A	584	603	Right-handed alpha
Helix 46	AF1	A	620	638	Right-handed alpha
Helix 47	AF2	A	662	681	Right-handed alpha
Helix 48	AF3	A	686	704	Right-handed alpha
Helix 49	AF4	A	706	725	Right-handed alpha
Helix 50	AF5	A	731	736	Right-handed alpha
Helix 51	AF6	A	740	754	Right-handed alpha
Helix 52	AF7	B	27	42	Right-handed alpha
Helix 53	AF8	B	44	54	Right-handed alpha
Helix 54	AF9	B	102	108	Right-handed alpha
Helix 55	AG1	B	163	175	Right-handed alpha
Helix 56	AG2	B	197	205	Right-handed alpha
Helix 57	AG3	B	222	227	Right-handed alpha
Helix 58	AG4	G	45	61	Right-handed alpha
Helix 59	AG5	G	74	82	Right-handed alpha
Helix 60	AG6	G	103	110	Right-handed alpha
Helix 61	AG7	G	154	174	Right-handed alpha
Helix 62	AG8	G	205	212	Right-handed alpha
Helix 63	AG9	J	127	139	Right-handed alpha
Helix 64	AH1	J	209	227	Right-handed alpha
Helix 65	AH2	J	228	235	Right-handed alpha
Helix 66	AH3	J	288	300	Right-handed alpha

There are 27 sheets in PDB entry 6XN5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	188	191	first strand
Strand 2	I	2	11	anti-parallel
Strand 3	I	195	197	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	188	191	first strand
Strand 2	I	2	11	anti-parallel
Strand 3	I	143	151	anti-parallel
Strand 4	I	94	97	anti-parallel
Strand 5	H	183	184	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	43	44	first strand
Strand 2	I	99	100	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	115	119	first strand
Strand 2	I	134	138	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	188	199	first strand
Strand 2	F	2	11	anti-parallel
Strand 3	F	143	151	anti-parallel
Strand 4	F	94	97	anti-parallel
Strand 5	B	184	185	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	43	44	first strand
Strand 2	F	99	100	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	84	first strand
Strand 2	F	89	90	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	120	first strand
Strand 2	F	133	138	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	183	184	first strand
Strand 2	G	94	97	parallel
Strand 3	G	143	151	anti-parallel
Strand 4	G	2	11	anti-parallel
Strand 5	G	188	197	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	143	151	first strand
Strand 2	H	2	11	anti-parallel
Strand 3	H	188	197	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	43	44	first strand
Strand 2	H	99	100	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	96	97	first strand
Strand 2	G	183	184	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	115	120	first strand
Strand 2	H	133	138	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	108	first strand
Strand 2	A	125	126	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	305	first strand
Strand 2	A	309	315	anti-parallel
Strand 3	A	247	255	anti-parallel
Strand 4	A	344	345	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	305	first strand
Strand 2	A	309	315	anti-parallel
Strand 3	A	247	255	anti-parallel
Strand 4	A	348	352	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	447	first strand
Strand 2	A	451	453	anti-parallel
Strand 3	A	437	440	anti-parallel
Strand 4	A	472	475	anti-parallel
Strand 5	A	487	488	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	568	572	first strand
Strand 2	A	578	583	anti-parallel
Strand 3	A	514	521	anti-parallel
Strand 4	A	608	615	anti-parallel
Strand 5	A	652	654	parallel
Strand 6	A	660	661	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	99	first strand
Strand 2	B	69	73	anti-parallel
Strand 3	B	63	66	anti-parallel
Strand 4	B	154	159	anti-parallel
Strand 5	B	2	8	anti-parallel
Strand 6	B	189	192	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	132	first strand
Strand 2	B	140	149	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	265	first strand
Strand 2	B	209	212	anti-parallel
Strand 3	B	292	295	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	237	first strand
Strand 2	B	256	259	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	277	first strand
Strand 2	B	284	288	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	44	first strand
Strand 2	G	99	100	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	115	120	first strand
Strand 2	G	133	138	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	158	161	first strand
Strand 2	J	197	203	anti-parallel
Strand 3	J	3	11	anti-parallel
Strand 4	J	344	348	anti-parallel
Strand 5	J	268	269	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	169	172	first strand
Strand 2	J	188	191	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XN5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XN5