Analysis of interatomic Contacts of Structural Units in PDB entry:
6XPE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XPE entry

There are 2 chains in PDB entry 6XPE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 HIS 52ASP 369
A
 HIS 52ASP 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6XPE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
65 84Right-handed alpha
Helix 2
AA2
B
106 124Right-handed alpha
Helix 3
AA3
B
138 168Right-handed alpha
Helix 4
AA4
B
176 196Right-handed alpha
Helix 5
AA5
B
211 239Right-handed alpha
Helix 6
AA6
B
246 274Right-handed alpha
Helix 7
AA7
B
284 293Right-handed alpha
Helix 8
AA8
B
327 340Right-handed alpha
Helix 9
AA9
A
65 84Right-handed alpha
Helix 10
AB1
A
106 124Right-handed alpha
Helix 11
AB2
A
138 168Right-handed alpha
Helix 12
AB3
A
176 196Right-handed alpha
Helix 13
AB4
A
211 239Right-handed alpha
Helix 14
AB5
A
246 274Right-handed alpha
Helix 15
AB6
A
284 293Right-handed alpha
Helix 16
AB7
A
327 340Right-handed alpha
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There are 2 sheets in PDB entry 6XPE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 307first strand
Strand 2
B
313 318anti-parallel
Strand 3
B
347 349parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 307first strand
Strand 2
A
313 318anti-parallel
Strand 3
A
347 349parallel
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