Analysis of interatomic Contacts of Structural Units in PDB entry:
6XQB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XQB entry

There are 6 chains in PDB entry 6XQB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 31GLU 919
B
 ASP 78ALA 191
C
 LYS 2GLN 63
D
 THR 84CYS 114
E
 G 3 A 9
F
 G 1 C 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6XQB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 132Right-handed alpha
Helix 2
AA2
A
139 149Right-handed alpha
Helix 3
AA3
A
153 159Right-handed 310
Helix 4
AA4
A
170 177Right-handed alpha
Helix 5
AA5
A
178 198Right-handed alpha
Helix 6
AA6
A
235 242Right-handed alpha
Helix 7
AA7
A
243 246Right-handed 310
Helix 8
AA8
A
249 260Right-handed 310
Helix 9
AA9
A
275 287Right-handed alpha
Helix 10
AB1
A
297 301Right-handed 310
Helix 11
AB2
A
303 315Right-handed alpha
Helix 12
AB3
A
316 319Right-handed 310
Helix 13
AB4
A
367 376Right-handed alpha
Helix 14
AB5
A
377 383Right-handed alpha
Helix 15
AB6
A
416 425Right-handed alpha
Helix 16
AB7
A
447 454Right-handed alpha
Helix 17
AB8
A
455 459Right-handed 310
Helix 18
AB9
A
465 480Right-handed alpha
Helix 19
AC1
A
489 493Right-handed 310
Helix 20
AC2
A
504 508Right-handed 310
Helix 21
AC3
A
511 519Right-handed alpha
Helix 22
AC4
A
520 532Right-handed alpha
Helix 23
AC5
A
561 573Right-handed alpha
Helix 24
AC6
A
576 581Right-handed alpha
Helix 25
AC7
A
596 607Right-handed alpha
Helix 26
AC8
A
621 626Right-handed alpha
Helix 27
AC9
A
627 638Right-handed alpha
Helix 28
AD1
A
647 662Right-handed alpha
Helix 29
AD2
A
686 710Right-handed alpha
Helix 30
AD3
A
717 732Right-handed alpha
Helix 31
AD4
A
738 752Right-handed alpha
Helix 32
AD5
A
768 774Right-handed alpha
Helix 33
AD6
A
778 789Right-handed alpha
Helix 34
AD7
A
833 843Right-handed alpha
Helix 35
AD8
A
854 865Right-handed alpha
Helix 36
AD9
A
866 872Right-handed 310
Helix 37
AE1
A
874 895Right-handed alpha
Helix 38
AE2
A
909 915Right-handed alpha
Helix 39
AE3
B
79 94Right-handed alpha
Helix 40
AE4
B
95 98Right-handed 310
Helix 41
AE5
B
101 108Right-handed alpha
Helix 42
AE6
B
110 114Right-handed 310
Helix 43
AE7
B
119 124Right-handed alpha
Helix 44
AE8
B
135 142Right-handed alpha
Helix 45
AE9
B
176 180Right-handed 310
Helix 46
AF1
C
3 20Right-handed alpha
Helix 47
AF2
C
25 40Right-handed alpha
Helix 48
AF3
C
44 62Right-handed alpha
Helix 49
AF4
D
85 99Right-handed alpha
Helix 50
AF5
D
100 112Right-handed alpha
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There are 8 sheets in PDB entry 6XQB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
44 49anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
223 224anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 355first strand
Strand 2
A
339 348anti-parallel
Strand 3
A
327 335anti-parallel
Strand 4
A
362 363parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 355first strand
Strand 2
A
339 348anti-parallel
Strand 3
A
327 335anti-parallel
Strand 4
B
115 116anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 390first strand
Strand 2
B
128 132parallel
Strand 3
B
184 189anti-parallel
Strand 4
B
153 160anti-parallel
Strand 5
B
146 148anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 400first strand
Strand 2
A
672 675anti-parallel
Strand 3
A
666 668anti-parallel
Strand 4
A
539 543parallel
Strand 5
A
557 559anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
753 758first strand
Strand 2
A
761 767anti-parallel
Strand 3
A
612 616anti-parallel
Strand 4
A
800 802anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 822first strand
Strand 2
A
825 831anti-parallel
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