Analysis of interatomic Contacts of Structural Units in PDB entry:
6XQO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XQO entry

There are 2 chains in PDB entry 6XQO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 LYS 110MET 442
J
 LEU 85ARG 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6XQO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
I
110 121Right-handed alpha
Helix 2
AA2
I
123 132Right-handed alpha
Helix 3
AA3
I
148 155Right-handed alpha
Helix 4
AA4
I
193 198Right-handed alpha
Helix 5
AA5
I
205 217Right-handed alpha
Helix 6
AA6
I
219 231Right-handed alpha
Helix 7
AA7
I
239 252Right-handed alpha
Helix 8
AA8
I
276 283Right-handed alpha
Helix 9
AA9
I
292 314Right-handed alpha
Helix 10
AB1
I
323 336Right-handed alpha
Helix 11
AB2
I
339 353Right-handed alpha
Helix 12
AB3
I
360 373Right-handed alpha
Helix 13
AB4
I
373 381Right-handed alpha
Helix 14
AB5
I
381 387Right-handed alpha
Helix 15
AB6
I
392 404Right-handed alpha
Helix 16
AB7
I
409 421Right-handed alpha
Helix 17
AB8
I
433 441Right-handed alpha
Helix 18
AB9
J
86 94Right-handed alpha
Helix 19
AC1
J
105 115Right-handed alpha
Helix 20
AC2
J
128 142Right-handed alpha
Helix 21
AC3
J
147 153Right-handed alpha
Helix 22
AC4
J
159 171Right-handed alpha
Helix 23
AC5
J
172 174Right-handed 310
Helix 24
AC6
J
175 185Right-handed alpha
Helix 25
AC7
J
193 211Right-handed alpha
Helix 26
AC8
J
232 239Right-handed alpha
Helix 27
AC9
J
248 272Right-handed alpha
Helix 28
AD1
J
280 291Right-handed alpha
Helix 29
AD2
J
296 306Right-handed alpha
Helix 30
AD3
J
314 327Right-handed alpha
Helix 31
AD4
J
327 342Right-handed alpha
Helix 32
AD5
J
346 358Right-handed alpha
Helix 33
AD6
J
363 374Right-handed alpha
Helix 34
AD7
J
383 392Right-handed alpha
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There are 3 sheets in PDB entry 6XQO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
134 135first strand
Strand 2
I
145 146anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
96 98first strand
Strand 2
J
101 103anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
278 279first strand
Strand 2
J
312 313anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il