Analysis of interatomic Contacts of Structural Units in PDB entry:
6XR0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XR0 entry

There are 3 chains in PDB entry 6XR0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	GLN 1	CYS 221
L	ASP 1	CYS 214
M	MET 21	SER 706

There are 34 helices in PDB entry 6XR0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	28	32	Right-handed 310
Helix 2	AA2	H	87	91	Right-handed 310
Helix 3	AA3	H	192	197	Right-handed alpha
Helix 4	AA4	H	206	209	Right-handed 310
Helix 5	AA5	L	79	83	Right-handed 310
Helix 6	AA6	L	121	127	Right-handed alpha
Helix 7	AA7	L	183	187	Right-handed alpha
Helix 8	AA8	M	29	46	Right-handed alpha
Helix 9	AA9	M	59	69	Right-handed alpha
Helix 10	AB1	M	78	88	Right-handed alpha
Helix 11	AB2	M	140	151	Right-handed alpha
Helix 12	AB3	M	159	168	Right-handed alpha
Helix 13	AB4	M	181	186	Right-handed alpha
Helix 14	AB5	M	208	219	Right-handed alpha
Helix 15	AB6	M	232	236	Right-handed 310
Helix 16	AB7	M	249	251	Right-handed 310
Helix 17	AB8	M	289	303	Right-handed alpha
Helix 18	AB9	M	315	319	Right-handed 310
Helix 19	AC1	M	339	344	Right-handed alpha
Helix 20	AC2	M	345	356	Right-handed alpha
Helix 21	AC3	M	372	389	Right-handed alpha
Helix 22	AC4	M	402	412	Right-handed alpha
Helix 23	AC5	M	421	432	Right-handed alpha
Helix 24	AC6	M	486	496	Right-handed alpha
Helix 25	AC7	M	505	514	Right-handed alpha
Helix 26	AC8	M	528	533	Right-handed 310
Helix 27	AC9	M	554	565	Right-handed alpha
Helix 28	AD1	M	576	581	Right-handed alpha
Helix 29	AD2	M	588	593	Right-handed alpha
Helix 30	AD3	M	595	597	Right-handed 310
Helix 31	AD4	M	612	617	Right-handed 310
Helix 32	AD5	M	634	650	Right-handed alpha
Helix 33	AD6	M	688	694	Right-handed alpha
Helix 34	AD7	M	694	706	Right-handed alpha

There are 19 sheets in PDB entry 6XR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	113	117	parallel
Strand 3	H	92	98	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	113	117	parallel
Strand 3	H	92	98	anti-parallel
Strand 4	H	108	109	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	126	130	first strand
Strand 2	H	141	151	anti-parallel
Strand 3	H	181	190	anti-parallel
Strand 4	H	169	171	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	126	130	first strand
Strand 2	H	141	151	anti-parallel
Strand 3	H	181	190	anti-parallel
Strand 4	H	175	176	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	157	160	first strand
Strand 2	H	200	205	anti-parallel
Strand 3	H	210	215	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	6	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	70	75	anti-parallel
Strand 4	L	62	67	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	103	106	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	54	first strand
Strand 2	L	44	49	anti-parallel
Strand 3	L	33	38	anti-parallel
Strand 4	L	85	90	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	114	118	first strand
Strand 2	L	129	139	anti-parallel
Strand 3	L	173	182	anti-parallel
Strand 4	L	159	163	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	153	155	first strand
Strand 2	L	145	150	anti-parallel
Strand 3	L	191	197	anti-parallel
Strand 4	L	205	210	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	23	27	first strand
Strand 2	M	52	56	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	74	77	first strand
Strand 2	M	280	284	anti-parallel
Strand 3	M	91	98	anti-parallel
Strand 4	M	331	334	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	171	172	first strand
Strand 2	M	129	131	parallel
Strand 3	M	224	228	parallel
Strand 4	M	106	114	anti-parallel
Strand 5	M	253	255	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	171	172	first strand
Strand 2	M	129	131	parallel
Strand 3	M	224	228	parallel
Strand 4	M	106	114	anti-parallel
Strand 5	M	274	277	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	365	370	first strand
Strand 2	M	394	399	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	418	420	first strand
Strand 2	M	626	629	anti-parallel
Strand 3	M	435	442	anti-parallel
Strand 4	M	677	681	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	516	518	first strand
Strand 2	M	474	476	parallel
Strand 3	M	570	574	parallel
Strand 4	M	452	458	anti-parallel
Strand 5	M	599	602	anti-parallel
Strand 6	M	608	610	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	516	518	first strand
Strand 2	M	474	476	parallel
Strand 3	M	570	574	parallel
Strand 4	M	452	458	anti-parallel
Strand 5	M	620	621	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XR0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XR0