Analysis of interatomic Contacts of Structural Units in PDB entry:
6XR5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XR5 entry

There are 4 chains in PDB entry 6XR5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 0	ALA 395
B	HIS 0	ALA 395
C	HIS 0	ALA 395
D	HIS 0	TRP 103

There are104 helices in PDB entry 6XR5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	74	94	Right-handed alpha
Helix 2	AA2	A	99	103	Right-handed 310
Helix 3	AA3	A	121	137	Right-handed alpha
Helix 4	AA4	A	142	154	Right-handed alpha
Helix 5	AA5	A	155	162	Right-handed 310
Helix 6	AA6	A	186	190	Right-handed 310
Helix 7	AA7	A	210	220	Right-handed alpha
Helix 8	AA8	A	220	244	Right-handed alpha
Helix 9	AA9	A	245	266	Right-handed alpha
Helix 10	AB1	A	275	293	Right-handed alpha
Helix 11	AB2	A	315	327	Right-handed alpha
Helix 12	AB3	A	349	353	Right-handed 310
Helix 13	AB4	A	379	383	Right-handed 310
Helix 14	AB5	B	74	94	Right-handed alpha
Helix 15	AB6	B	99	103	Right-handed 310
Helix 16	AB7	B	121	137	Right-handed alpha
Helix 17	AB8	B	142	154	Right-handed alpha
Helix 18	AB9	B	155	162	Right-handed 310
Helix 19	AC1	B	186	190	Right-handed 310
Helix 20	AC2	B	209	220	Right-handed alpha
Helix 21	AC3	B	220	244	Right-handed alpha
Helix 22	AC4	B	245	266	Right-handed alpha
Helix 23	AC5	B	275	293	Right-handed alpha
Helix 24	AC6	B	315	327	Right-handed alpha
Helix 25	AC7	B	349	353	Right-handed 310
Helix 26	AC8	B	379	383	Right-handed 310
Helix 27	AC9	C	74	94	Right-handed alpha
Helix 28	AD1	C	99	103	Right-handed 310
Helix 29	AD2	C	121	137	Right-handed alpha
Helix 30	AD3	C	142	155	Right-handed alpha
Helix 31	AD4	C	156	162	Right-handed 310
Helix 32	AD5	C	186	190	Right-handed 310
Helix 33	AD6	C	209	220	Right-handed alpha
Helix 34	AD7	C	221	244	Right-handed alpha
Helix 35	AD8	C	245	266	Right-handed alpha
Helix 36	AD9	C	275	293	Right-handed alpha
Helix 37	AE1	C	315	327	Right-handed alpha
Helix 38	AE2	C	349	353	Right-handed 310
Helix 39	AE3	C	379	383	Right-handed 310
Helix 40	AE4	D	74	94	Right-handed alpha
Helix 41	AE5	D	99	103	Right-handed 310
Helix 42	AE6	D	121	137	Right-handed alpha
Helix 43	AE7	D	142	154	Right-handed alpha
Helix 44	AE8	D	155	162	Right-handed 310
Helix 45	AE9	D	186	190	Right-handed 310
Helix 46	AF1	D	209	220	Right-handed alpha
Helix 47	AF2	D	221	244	Right-handed alpha
Helix 48	AF3	D	245	266	Right-handed alpha
Helix 49	AF4	D	275	293	Right-handed alpha
Helix 50	AF5	D	315	327	Right-handed alpha
Helix 51	AF6	D	349	353	Right-handed 310
Helix 52	AF7	D	379	383	Right-handed 310
Helix 53	AF8	E	74	94	Right-handed alpha
Helix 54	AF9	E	99	103	Right-handed 310
Helix 55	AG1	E	121	137	Right-handed alpha
Helix 56	AG2	E	142	155	Right-handed alpha
Helix 57	AG3	E	156	162	Right-handed 310
Helix 58	AG4	E	186	190	Right-handed 310
Helix 59	AG5	E	209	220	Right-handed alpha
Helix 60	AG6	E	220	244	Right-handed alpha
Helix 61	AG7	E	245	266	Right-handed alpha
Helix 62	AG8	E	275	293	Right-handed alpha
Helix 63	AG9	E	315	327	Right-handed alpha
Helix 64	AH1	E	349	353	Right-handed 310
Helix 65	AH2	E	379	383	Right-handed 310
Helix 66	AH3	F	74	94	Right-handed alpha
Helix 67	AH4	F	99	103	Right-handed 310
Helix 68	AH5	F	121	137	Right-handed alpha
Helix 69	AH6	F	142	155	Right-handed alpha
Helix 70	AH7	F	156	162	Right-handed 310
Helix 71	AH8	F	186	190	Right-handed 310
Helix 72	AH9	F	213	220	Right-handed alpha
Helix 73	AI1	F	220	244	Right-handed alpha
Helix 74	AI2	F	245	266	Right-handed alpha
Helix 75	AI3	F	275	293	Right-handed alpha
Helix 76	AI4	F	315	327	Right-handed alpha
Helix 77	AI5	F	349	353	Right-handed 310
Helix 78	AI6	F	379	383	Right-handed 310
Helix 79	AI7	G	74	94	Right-handed alpha
Helix 80	AI8	G	99	103	Right-handed 310
Helix 81	AI9	G	121	137	Right-handed alpha
Helix 82	AJ1	G	142	155	Right-handed alpha
Helix 83	AJ2	G	156	162	Right-handed 310
Helix 84	AJ3	G	186	190	Right-handed 310
Helix 85	AJ4	G	210	220	Right-handed alpha
Helix 86	AJ5	G	222	244	Right-handed alpha
Helix 87	AJ6	G	245	266	Right-handed alpha
Helix 88	AJ7	G	275	293	Right-handed alpha
Helix 89	AJ8	G	315	327	Right-handed alpha
Helix 90	AJ9	G	349	353	Right-handed 310
Helix 91	AK1	G	379	383	Right-handed 310
Helix 92	AK2	H	74	94	Right-handed alpha
Helix 93	AK3	H	99	103	Right-handed 310
Helix 94	AK4	H	121	137	Right-handed alpha
Helix 95	AK5	H	142	154	Right-handed alpha
Helix 96	AK6	H	155	162	Right-handed 310
Helix 97	AK7	H	186	190	Right-handed 310
Helix 98	AK8	H	210	220	Right-handed alpha
Helix 99	AK9	H	222	244	Right-handed alpha
Helix 100	AL1	H	245	266	Right-handed alpha
Helix 101	AL2	H	275	293	Right-handed alpha
Helix 102	AL3	H	315	327	Right-handed alpha
Helix 103	AL4	H	349	353	Right-handed 310
Helix 104	AL5	H	379	383	Right-handed 310

There are 32 sheets in PDB entry 6XR5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	68	first strand
Strand 2	A	60	63	anti-parallel
Strand 3	A	105	111	parallel
Strand 4	A	45	51	anti-parallel
Strand 5	A	3	9	anti-parallel
Strand 6	A	376	377	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	16	first strand
Strand 2	A	33	37	anti-parallel
Strand 3	A	165	169	anti-parallel
Strand 4	A	180	185	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	28	29	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	301	first strand
Strand 2	A	307	312	anti-parallel
Strand 3	A	193	200	anti-parallel
Strand 4	A	363	370	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	68	first strand
Strand 2	B	60	63	anti-parallel
Strand 3	B	105	111	parallel
Strand 4	B	45	51	anti-parallel
Strand 5	B	3	9	anti-parallel
Strand 6	B	376	377	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	16	first strand
Strand 2	B	33	37	anti-parallel
Strand 3	B	165	169	anti-parallel
Strand 4	B	180	185	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	28	29	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	301	first strand
Strand 2	B	307	312	anti-parallel
Strand 3	B	193	200	anti-parallel
Strand 4	B	363	370	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	68	first strand
Strand 2	C	60	63	anti-parallel
Strand 3	C	105	111	parallel
Strand 4	C	45	51	anti-parallel
Strand 5	C	3	9	anti-parallel
Strand 6	C	376	377	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	16	first strand
Strand 2	C	33	37	anti-parallel
Strand 3	C	165	168	anti-parallel
Strand 4	C	181	185	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	23	first strand
Strand 2	C	28	29	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	297	301	first strand
Strand 2	C	307	312	anti-parallel
Strand 3	C	193	200	anti-parallel
Strand 4	C	363	370	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	68	first strand
Strand 2	D	60	63	anti-parallel
Strand 3	D	105	111	parallel
Strand 4	D	44	51	anti-parallel
Strand 5	D	3	10	anti-parallel
Strand 6	D	376	377	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	16	first strand
Strand 2	D	33	37	anti-parallel
Strand 3	D	165	168	anti-parallel
Strand 4	D	181	185	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	28	29	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	301	first strand
Strand 2	D	307	312	anti-parallel
Strand 3	D	193	200	anti-parallel
Strand 4	D	363	370	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	68	first strand
Strand 2	E	60	63	anti-parallel
Strand 3	E	105	111	parallel
Strand 4	E	45	51	anti-parallel
Strand 5	E	3	9	anti-parallel
Strand 6	E	376	377	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	16	first strand
Strand 2	E	33	37	anti-parallel
Strand 3	E	165	168	anti-parallel
Strand 4	E	181	185	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	23	first strand
Strand 2	E	28	29	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	298	301	first strand
Strand 2	E	307	312	anti-parallel
Strand 3	E	193	200	anti-parallel
Strand 4	E	363	370	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	68	first strand
Strand 2	F	60	63	anti-parallel
Strand 3	F	105	111	parallel
Strand 4	F	45	51	anti-parallel
Strand 5	F	3	9	anti-parallel
Strand 6	F	376	377	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	16	first strand
Strand 2	F	33	37	anti-parallel
Strand 3	F	165	168	anti-parallel
Strand 4	F	181	185	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	23	first strand
Strand 2	F	28	29	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	297	301	first strand
Strand 2	F	307	312	anti-parallel
Strand 3	F	193	200	anti-parallel
Strand 4	F	363	370	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	68	first strand
Strand 2	G	60	63	anti-parallel
Strand 3	G	105	111	parallel
Strand 4	G	45	51	anti-parallel
Strand 5	G	3	9	anti-parallel
Strand 6	G	376	377	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	16	first strand
Strand 2	G	33	37	anti-parallel
Strand 3	G	165	168	anti-parallel
Strand 4	G	181	185	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	21	23	first strand
Strand 2	G	28	29	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	297	301	first strand
Strand 2	G	307	312	anti-parallel
Strand 3	G	193	200	anti-parallel
Strand 4	G	363	370	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	66	68	first strand
Strand 2	H	60	63	anti-parallel
Strand 3	H	105	111	parallel
Strand 4	H	45	51	anti-parallel
Strand 5	H	3	9	anti-parallel
Strand 6	H	376	377	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	16	first strand
Strand 2	H	33	37	anti-parallel
Strand 3	H	165	169	anti-parallel
Strand 4	H	180	185	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	21	23	first strand
Strand 2	H	28	29	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	298	301	first strand
Strand 2	H	307	312	anti-parallel
Strand 3	H	193	200	anti-parallel
Strand 4	H	363	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XR5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XR5