Analysis of interatomic Contacts of Structural Units in PDB entry:
6XRK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XRK entry

There are 2 chains in PDB entry 6XRK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1VAL 357
B
 SER 1TYR 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6XRK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 15Right-handed alpha
Helix 2
AA2
A
35 41Right-handed alpha
Helix 3
AA3
A
49 55Right-handed alpha
Helix 4
AA4
A
56 59Right-handed 310
Helix 5
AA5
A
70 74Right-handed 310
Helix 6
AA6
A
81 98Right-handed alpha
Helix 7
AA7
A
107 111Right-handed 310
Helix 8
AA8
A
114 121Right-handed 310
Helix 9
AA9
A
122 138Right-handed alpha
Helix 10
AB1
A
161 179Right-handed alpha
Helix 11
AB2
A
180 185Right-handed 310
Helix 12
AB3
A
193 195Right-handed 310
Helix 13
AB4
A
196 201Right-handed alpha
Helix 14
AB5
A
224 229Right-handed alpha
Helix 15
AB6
A
256 274Right-handed alpha
Helix 16
AB7
A
275 278Right-handed 310
Helix 17
AB8
A
295 313Right-handed alpha
Helix 18
AB9
A
343 356Right-handed alpha
Helix 19
AC1
B
6 15Right-handed alpha
Helix 20
AC2
B
35 41Right-handed alpha
Helix 21
AC3
B
49 55Right-handed alpha
Helix 22
AC4
B
56 59Right-handed 310
Helix 23
AC5
B
70 74Right-handed 310
Helix 24
AC6
B
81 98Right-handed alpha
Helix 25
AC7
B
107 111Right-handed 310
Helix 26
AC8
B
114 121Right-handed 310
Helix 27
AC9
B
122 138Right-handed alpha
Helix 28
AD1
B
161 179Right-handed alpha
Helix 29
AD2
B
180 185Right-handed 310
Helix 30
AD3
B
193 195Right-handed 310
Helix 31
AD4
B
196 201Right-handed alpha
Helix 32
AD5
B
224 229Right-handed alpha
Helix 33
AD6
B
256 274Right-handed alpha
Helix 34
AD7
B
275 278Right-handed 310
Helix 35
AD8
B
295 313Right-handed alpha
Helix 36
AD9
B
343 356Right-handed alpha
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There are 8 sheets in PDB entry 6XRK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 19first strand
Strand 2
A
61 66parallel
Strand 3
A
101 104parallel
Strand 4
A
144 147parallel
Strand 5
A
188 191parallel
Strand 6
A
215 221parallel
Strand 7
A
281 286parallel
Strand 8
A
316 320parallel
Strand 9
A
16 19parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
159 160anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 239first strand
Strand 2
A
245 247anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
Strand 2
A
340 341anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 19first strand
Strand 2
B
61 66parallel
Strand 3
B
101 104parallel
Strand 4
B
144 147parallel
Strand 5
B
188 191parallel
Strand 6
B
215 221parallel
Strand 7
B
281 286parallel
Strand 8
B
316 320parallel
Strand 9
B
16 19parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 156first strand
Strand 2
B
159 160anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 239first strand
Strand 2
B
245 247anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 335first strand
Strand 2
B
340 341anti-parallel
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