Analysis of interatomic Contacts of Structural Units in PDB entry:
6XRS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XRS entry

There are 4 chains in PDB entry 6XRS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 15	VAL 447
B	ILE 15	VAL 447
C	MET 16	VAL 447
D	ILE 15	ILE 210

There are 62 helices in PDB entry 6XRS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	38	Right-handed alpha
Helix 2	AA2	A	73	76	Right-handed 310
Helix 3	AA3	A	88	98	Right-handed alpha
Helix 4	AA4	A	112	124	Right-handed alpha
Helix 5	AA5	A	142	147	Right-handed alpha
Helix 6	AA6	A	148	152	Right-handed 310
Helix 7	AA7	A	166	176	Right-handed alpha
Helix 8	AA8	A	202	212	Right-handed alpha
Helix 9	AA9	A	262	273	Right-handed alpha
Helix 10	AB1	A	287	300	Right-handed alpha
Helix 11	AB2	A	310	314	Right-handed 310
Helix 12	AB3	A	315	330	Right-handed alpha
Helix 13	AB4	A	331	334	Right-handed 310
Helix 14	AB5	A	351	364	Right-handed alpha
Helix 15	AB6	A	368	383	Right-handed alpha
Helix 16	AB7	A	419	435	Right-handed alpha
Helix 17	AB8	B	29	38	Right-handed alpha
Helix 18	AB9	B	73	75	Right-handed 310
Helix 19	AC1	B	88	98	Right-handed alpha
Helix 20	AC2	B	112	124	Right-handed alpha
Helix 21	AC3	B	140	149	Right-handed alpha
Helix 22	AC4	B	150	152	Right-handed 310
Helix 23	AC5	B	166	176	Right-handed alpha
Helix 24	AC6	B	202	212	Right-handed alpha
Helix 25	AC7	B	262	273	Right-handed alpha
Helix 26	AC8	B	287	300	Right-handed alpha
Helix 27	AC9	B	310	314	Right-handed 310
Helix 28	AD1	B	315	330	Right-handed alpha
Helix 29	AD2	B	331	334	Right-handed 310
Helix 30	AD3	B	348	364	Right-handed alpha
Helix 31	AD4	B	368	383	Right-handed alpha
Helix 32	AD5	B	419	435	Right-handed alpha
Helix 33	AD6	C	29	39	Right-handed alpha
Helix 34	AD7	C	73	75	Right-handed 310
Helix 35	AD8	C	88	98	Right-handed alpha
Helix 36	AD9	C	112	124	Right-handed alpha
Helix 37	AE1	C	142	152	Right-handed 310
Helix 38	AE2	C	166	176	Right-handed alpha
Helix 39	AE3	C	202	217	Right-handed alpha
Helix 40	AE4	C	262	273	Right-handed alpha
Helix 41	AE5	C	287	300	Right-handed alpha
Helix 42	AE6	C	310	314	Right-handed 310
Helix 43	AE7	C	315	330	Right-handed alpha
Helix 44	AE8	C	331	334	Right-handed 310
Helix 45	AE9	C	348	364	Right-handed alpha
Helix 46	AF1	C	368	383	Right-handed alpha
Helix 47	AF2	C	419	435	Right-handed alpha
Helix 48	AF3	D	29	39	Right-handed alpha
Helix 49	AF4	D	73	75	Right-handed 310
Helix 50	AF5	D	88	98	Right-handed alpha
Helix 51	AF6	D	112	123	Right-handed alpha
Helix 52	AF7	D	142	152	Right-handed 310
Helix 53	AF8	D	166	176	Right-handed alpha
Helix 54	AF9	D	202	212	Right-handed alpha
Helix 55	AG1	D	262	273	Right-handed alpha
Helix 56	AG2	D	287	300	Right-handed alpha
Helix 57	AG3	D	310	314	Right-handed 310
Helix 58	AG4	D	315	330	Right-handed alpha
Helix 59	AG5	D	331	334	Right-handed 310
Helix 60	AG6	D	348	364	Right-handed alpha
Helix 61	AG7	D	368	383	Right-handed alpha
Helix 62	AG8	D	419	435	Right-handed alpha

There are 14 sheets in PDB entry 6XRS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	59	first strand
Strand 2	A	68	71	anti-parallel
Strand 3	A	19	23	parallel
Strand 4	A	100	106	parallel
Strand 5	A	129	134	parallel
Strand 6	A	156	158	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	C	51	53	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	217	first strand
Strand 2	A	230	235	anti-parallel
Strand 3	A	238	243	anti-parallel
Strand 4	A	192	196	parallel
Strand 5	A	275	281	parallel
Strand 6	A	303	309	parallel
Strand 7	A	338	340	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	402	first strand
Strand 2	A	407	413	anti-parallel
Strand 3	A	442	446	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	59	first strand
Strand 2	B	68	71	anti-parallel
Strand 3	B	19	23	parallel
Strand 4	B	100	106	parallel
Strand 5	B	129	134	parallel
Strand 6	B	157	158	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	53	first strand
Strand 2	D	51	53	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	217	first strand
Strand 2	B	230	235	anti-parallel
Strand 3	B	238	243	anti-parallel
Strand 4	B	192	196	parallel
Strand 5	B	275	281	parallel
Strand 6	B	303	309	parallel
Strand 7	B	337	340	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	402	first strand
Strand 2	B	407	413	anti-parallel
Strand 3	B	442	446	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	60	first strand
Strand 2	C	67	71	anti-parallel
Strand 3	C	19	24	parallel
Strand 4	C	100	106	parallel
Strand 5	C	129	134	parallel
Strand 6	C	156	158	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	235	first strand
Strand 2	C	238	243	anti-parallel
Strand 3	C	192	196	parallel
Strand 4	C	275	281	parallel
Strand 5	C	303	309	parallel
Strand 6	C	338	340	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	402	first strand
Strand 2	C	407	413	anti-parallel
Strand 3	C	442	445	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	68	71	anti-parallel
Strand 3	D	19	23	parallel
Strand 4	D	100	106	parallel
Strand 5	D	129	134	parallel
Strand 6	D	157	158	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	216	218	first strand
Strand 2	D	230	235	anti-parallel
Strand 3	D	238	243	anti-parallel
Strand 4	D	192	196	parallel
Strand 5	D	275	281	parallel
Strand 6	D	303	309	parallel
Strand 7	D	338	340	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	394	402	first strand
Strand 2	D	407	413	anti-parallel
Strand 3	D	442	445	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XRS

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XRS