Analysis of interatomic Contacts of Structural Units in PDB entry:
6XS4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XS4 entry

There are 2 chains in PDB entry 6XS4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 810
B	MET 1	PHE 462

There are 78 helices in PDB entry 6XS4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	22	Right-handed alpha
Helix 2	AA2	A	30	43	Right-handed alpha
Helix 3	AA3	A	47	63	Right-handed alpha
Helix 4	AA4	A	92	98	Right-handed alpha
Helix 5	AA5	A	113	128	Right-handed alpha
Helix 6	AA6	A	131	137	Right-handed alpha
Helix 7	AA7	A	141	151	Right-handed alpha
Helix 8	AA8	A	155	160	Right-handed alpha
Helix 9	AA9	A	169	190	Right-handed alpha
Helix 10	AB1	A	196	234	Right-handed alpha
Helix 11	AB2	A	236	254	Right-handed alpha
Helix 12	AB3	A	260	279	Right-handed alpha
Helix 13	AB4	A	288	293	Right-handed alpha
Helix 14	AB5	A	293	302	Right-handed alpha
Helix 15	AB6	A	308	326	Right-handed alpha
Helix 16	AB7	A	331	338	Right-handed alpha
Helix 17	AB8	A	364	378	Right-handed alpha
Helix 18	AB9	A	393	405	Right-handed alpha
Helix 19	AC1	A	416	427	Right-handed alpha
Helix 20	AC2	A	429	434	Right-handed alpha
Helix 21	AC3	A	462	470	Right-handed alpha
Helix 22	AC4	A	496	530	Right-handed alpha
Helix 23	AC5	A	532	538	Right-handed alpha
Helix 24	AC6	A	541	546	Right-handed alpha
Helix 25	AC7	A	548	552	Right-handed 310
Helix 26	AC8	A	565	580	Right-handed alpha
Helix 27	AC9	A	587	597	Right-handed alpha
Helix 28	AD1	A	601	614	Right-handed alpha
Helix 29	AD2	A	622	641	Right-handed alpha
Helix 30	AD3	A	663	665	Right-handed 310
Helix 31	AD4	A	666	673	Right-handed alpha
Helix 32	AD5	A	700	711	Right-handed alpha
Helix 33	AD6	A	712	717	Right-handed 310
Helix 34	AD7	A	729	733	Right-handed 310
Helix 35	AD8	A	734	751	Right-handed alpha
Helix 36	AD9	A	763	773	Right-handed alpha
Helix 37	AE1	A	774	778	Right-handed 310
Helix 38	AE2	A	792	794	Right-handed 310
Helix 39	AE3	A	795	804	Right-handed alpha
Helix 40	AE4	B	10	22	Right-handed alpha
Helix 41	AE5	B	30	43	Right-handed alpha
Helix 42	AE6	B	47	63	Right-handed alpha
Helix 43	AE7	B	92	99	Right-handed alpha
Helix 44	AE8	B	113	128	Right-handed alpha
Helix 45	AE9	B	131	138	Right-handed alpha
Helix 46	AF1	B	141	151	Right-handed alpha
Helix 47	AF2	B	155	160	Right-handed alpha
Helix 48	AF3	B	169	190	Right-handed alpha
Helix 49	AF4	B	196	234	Right-handed alpha
Helix 50	AF5	B	236	254	Right-handed alpha
Helix 51	AF6	B	260	279	Right-handed alpha
Helix 52	AF7	B	288	293	Right-handed alpha
Helix 53	AF8	B	293	302	Right-handed alpha
Helix 54	AF9	B	308	326	Right-handed alpha
Helix 55	AG1	B	333	338	Right-handed 310
Helix 56	AG2	B	364	378	Right-handed alpha
Helix 57	AG3	B	393	405	Right-handed alpha
Helix 58	AG4	B	416	427	Right-handed alpha
Helix 59	AG5	B	429	435	Right-handed alpha
Helix 60	AG6	B	462	470	Right-handed alpha
Helix 61	AG7	B	496	530	Right-handed alpha
Helix 62	AG8	B	532	538	Right-handed alpha
Helix 63	AG9	B	541	546	Right-handed alpha
Helix 64	AH1	B	548	552	Right-handed 310
Helix 65	AH2	B	565	580	Right-handed alpha
Helix 66	AH3	B	587	597	Right-handed alpha
Helix 67	AH4	B	601	614	Right-handed alpha
Helix 68	AH5	B	622	641	Right-handed alpha
Helix 69	AH6	B	666	673	Right-handed alpha
Helix 70	AH7	B	700	710	Right-handed alpha
Helix 71	AH8	B	711	712	Right-handed 310
Helix 72	AH9	B	713	717	Right-handed 310
Helix 73	AI1	B	729	733	Right-handed 310
Helix 74	AI2	B	734	751	Right-handed alpha
Helix 75	AI3	B	763	773	Right-handed alpha
Helix 76	AI4	B	774	777	Right-handed 310
Helix 77	AI5	B	792	794	Right-handed 310
Helix 78	AI6	B	795	804	Right-handed alpha

There are 16 sheets in PDB entry 6XS4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	29	first strand
Strand 2	A	84	85	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	459	461	anti-parallel
Strand 3	A	562	564	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	167	first strand
Strand 2	A	284	285	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	350	first strand
Strand 2	A	383	388	parallel
Strand 3	A	412	415	parallel
Strand 4	A	756	761	anti-parallel
Strand 5	A	724	727	parallel
Strand 6	A	807	808	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	355	first strand
Strand 2	A	358	361	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	438	first strand
Strand 2	A	444	446	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	560	first strand
Strand 2	A	653	658	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	783	first strand
Strand 2	A	788	790	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	29	first strand
Strand 2	B	84	85	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	459	461	anti-parallel
Strand 3	B	562	564	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	350	first strand
Strand 2	B	383	388	parallel
Strand 3	B	412	415	parallel
Strand 4	B	756	757	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	355	first strand
Strand 2	B	358	361	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	437	438	first strand
Strand 2	B	444	445	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	556	560	first strand
Strand 2	B	653	658	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	760	761	first strand
Strand 2	B	726	727	parallel
Strand 3	B	807	808	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	781	783	first strand
Strand 2	B	788	790	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XS4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XS4